J7_6ERI_001
3D structure
- PDB id
- 6ERI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the chloroplast ribosome with chl-RRF and hibernation-promoting factor
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- AACGAGGAAAG*UCUCAAGC*GACAUG*CUAC*GCGUUA*UC*GACU
- Length
- 41 nucleotides
- Bulged bases
- 6ERI|1|AA|G|541, 6ERI|1|AA|A|2035
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6ERI|1|AA|A|5
6ERI|1|AA|A|6
6ERI|1|AA|C|7
6ERI|1|AA|G|8
6ERI|1|AA|A|9
6ERI|1|AA|G|10
6ERI|1|AA|G|11
6ERI|1|AA|A|12
6ERI|1|AA|A|13
6ERI|1|AA|A|14
6ERI|1|AA|G|15
*
6ERI|1|AA|U|535
6ERI|1|AA|C|536
6ERI|1|AA|U|537
6ERI|1|AA|C|538
6ERI|1|AA|A|539
6ERI|1|AA|A|540
6ERI|1|AA|G|541
6ERI|1|AA|C|542
*
6ERI|1|AA|G|2032
6ERI|1|AA|A|2033
6ERI|1|AA|C|2034
6ERI|1|AA|A|2035
6ERI|1|AA|U|2036
6ERI|1|AA|G|2037
*
6ERI|1|AA|C|2054
6ERI|1|AA|U|2055
6ERI|1|AA|A|2056
6ERI|1|AA|C|2057
*
6ERI|1|AA|G|2642
6ERI|1|AA|C|2643
6ERI|1|AA|G|2644
6ERI|1|AA|U|2645
6ERI|1|AA|U|2646
6ERI|1|AA|A|2647
*
6ERI|1|AA|U|2806
6ERI|1|AA|C|2807
*
6ERI|1|AB|G|98
6ERI|1|AB|A|99
6ERI|1|AB|C|100
6ERI|1|AB|U|101
Current chains
- Chain AA
- 23S ribosomal RNA
- Chain AB
- 4.5S ribosomal RNA
Nearby chains
- Chain AD
- 50S ribosomal protein L3, chloroplastic
- Chain AJ
- 50S ribosomal protein L13, chloroplastic
- Chain AQ
- 50S ribosomal protein L20, chloroplastic
- Chain AS
- 50S ribosomal protein L22, chloroplastic
- Chain Aa
- 50S ribosomal protein L32, chloroplastic
Coloring options: