J7_6ERI_002
3D structure
- PDB id
- 6ERI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the chloroplast ribosome with chl-RRF and hibernation-promoting factor
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- CGAAAU*AG*UGAG*CGAGAG*CGGAU*GG*CGGUAG
- Length
- 31 nucleotides
- Bulged bases
- 6ERI|1|AA|A|973
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6ERI|1|AA|C|828
6ERI|1|AA|G|829
6ERI|1|AA|A|830
6ERI|1|AA|A|831
6ERI|1|AA|A|832
6ERI|1|AA|U|833
*
6ERI|1|AA|A|846
6ERI|1|AA|G|847
*
6ERI|1|AA|U|971
6ERI|1|AA|G|972
6ERI|1|AA|A|973
6ERI|1|AA|G|974
*
6ERI|1|AA|C|999
6ERI|1|AA|G|1000
6ERI|1|AA|A|1001
6ERI|1|AA|G|1002
6ERI|1|AA|A|1003
6ERI|1|AA|G|1004
*
6ERI|1|AA|C|1015
6ERI|1|AA|G|1016
6ERI|1|AA|G|1017
6ERI|1|AA|A|1018
6ERI|1|AA|U|1019
*
6ERI|1|AA|G|1190
6ERI|1|AA|G|1191
*
6ERI|1|AA|C|1206
6ERI|1|AA|G|1207
6ERI|1|AA|G|1208
6ERI|1|AA|U|1209
6ERI|1|AA|A|1210
6ERI|1|AA|G|1211
Current chains
- Chain AA
- 23S ribosomal RNA
Nearby chains
- Chain AL
- 50S ribosomal protein L15, chloroplastic
- Chain AQ
- 50S ribosomal protein L20, chloroplastic
- Chain AR
- 50S ribosomal protein L21, chloroplastic
- Chain Ad
- 50S ribosomal protein L35, chloroplastic
- Chain Af
- 50S ribosomal protein 6, chloroplastic
- Chain Ax
- 5S ribosomal RNA; 5S rRNA
Coloring options: