J7_6GZ4_001
3D structure
- PDB id
- 6GZ4 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- tRNA translocation by the eukaryotic 80S ribosome and the impact of GTP hydrolysis, Translocation-intermediate-POST-2 (TI-POST-2)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- CGAAGU*AG*UGGG*CGCUGC*GAACG*CC*GAGUAG
- Length
- 31 nucleotides
- Bulged bases
- 6GZ4|1|A2|G|1835
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6GZ4|1|A2|C|1648
6GZ4|1|A2|G|1649
6GZ4|1|A2|A|1650
6GZ4|1|A2|A|1651
6GZ4|1|A2|G|1652
6GZ4|1|A2|U|1653
*
6GZ4|1|A2|A|1666
6GZ4|1|A2|G|1667
*
6GZ4|1|A2|U|1833
6GZ4|1|A2|G|1834
6GZ4|1|A2|G|1835
6GZ4|1|A2|G|1836
*
6GZ4|1|A2|C|1860
6GZ4|1|A2|G|1861
6GZ4|1|A2|C|1862
6GZ4|1|A2|U|1863
6GZ4|1|A2|G|1864
6GZ4|1|A2|C|1865
*
6GZ4|1|A2|G|1876
6GZ4|1|A2|A|1877
6GZ4|1|A2|A|1878
6GZ4|1|A2|C|1879
6GZ4|1|A2|G|1880
*
6GZ4|1|A2|C|2058
6GZ4|1|A2|C|2059
*
6GZ4|1|A2|G|2257
6GZ4|1|A2|A|2258
6GZ4|1|A2|G|2259
6GZ4|1|A2|U|2260
6GZ4|1|A2|A|2261
6GZ4|1|A2|G|2262
Current chains
- Chain A2
- 28S ribosomal RNA
Nearby chains
- Chain A4
- 5S ribosomal RNA; 5S rRNA
- Chain AC
- ribosomal protein uL4
- Chain AF
- ribosomal protein uL30
- Chain AL
- ribosomal protein eL13
- Chain AQ
- ribosomal protein eL18
- Chain AT
- ribosomal protein eL21
- Chain Aa
- ribosomal protein uL15
- Chain Ab
- ribosomal protein eL29
- Chain Ae
- ribosomal protein eL32
- Chain Af
- ribosomal protein eL33
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