J7_6GZZ_001
3D structure
- PDB id
- 6GZZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- T. thermophilus hibernating 100S ribosome (amc)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.13 Å
Loop
- Sequence
- CCCCGAAAUG*CAG*UGAG*CGAGCGC*GAGACCG*CGGGUCUGG*CCAGGCGGUAGGGG
- Length
- 54 nucleotides
- Bulged bases
- 6GZZ|1|A1|A|992, 6GZZ|1|A1|C|1022
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6GZZ|1|A1|C|863
6GZZ|1|A1|C|864
6GZZ|1|A1|C|865
6GZZ|1|A1|C|866
6GZZ|1|A1|G|867
6GZZ|1|A1|A|868
6GZZ|1|A1|A|869
6GZZ|1|A1|A|870
6GZZ|1|A1|U|871
6GZZ|1|A1|G|872
*
6GZZ|1|A1|C|883
6GZZ|1|A1|A|884
6GZZ|1|A1|G|885
*
6GZZ|1|A1|U|990
6GZZ|1|A1|G|991
6GZZ|1|A1|A|992
6GZZ|1|A1|G|993
*
6GZZ|1|A1|C|1018
6GZZ|1|A1|G|1019
6GZZ|1|A1|A|1020
6GZZ|1|A1|G|1021
6GZZ|1|A1|C|1022
6GZZ|1|A1|G|1023
6GZZ|1|A1|C|1024
*
6GZZ|1|A1|G|1035
6GZZ|1|A1|A|1036
6GZZ|1|A1|G|1037
6GZZ|1|A1|A|1038
6GZZ|1|A1|C|1039
6GZZ|1|A1|C|1040
6GZZ|1|A1|G|1041
*
6GZZ|1|A1|C|1209
6GZZ|1|A1|G|1210
6GZZ|1|A1|G|1211
6GZZ|1|A1|G|1212
6GZZ|1|A1|U|1213
6GZZ|1|A1|C|1214
6GZZ|1|A1|U|1215
6GZZ|1|A1|G|1216
6GZZ|1|A1|G|1217
*
6GZZ|1|A1|C|1227
6GZZ|1|A1|C|1228
6GZZ|1|A1|A|1229
6GZZ|1|A1|G|1230
6GZZ|1|A1|G|1231
6GZZ|1|A1|C|1232
6GZZ|1|A1|G|1233
6GZZ|1|A1|G|1234
6GZZ|1|A1|U|1235
6GZZ|1|A1|A|1236
6GZZ|1|A1|G|1237
6GZZ|1|A1|G|1238
6GZZ|1|A1|G|1239
6GZZ|1|A1|G|1240
Current chains
- Chain A1
- 23S ribosomal RNA
Nearby chains
- Chain B1
- 5S ribosomal RNA; 5S rRNA
- Chain K1
- 50S ribosomal protein L15
- Chain P1
- 50S ribosomal protein L20
- Chain Q1
- 50S ribosomal protein L21
- Chain Y1
- 50S ribosomal protein L30
- Chain d1
- 50S ribosomal protein L35
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