J7_6GZZ_002
3D structure
- PDB id
- 6GZZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- T. thermophilus hibernating 100S ribosome (amc)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.13 Å
Loop
- Sequence
- GUGGAGCUUUACUGCAGCC*GCGGGCAGUUUG*CG*CGC*GC*GUGAACC*GAUCAACGGAUAAAAGUUACCCC
- Length
- 68 nucleotides
- Bulged bases
- 6GZZ|1|A1|U|2100, 6GZZ|1|A1|U|2404, 6GZZ|1|A1|G|2442, 6GZZ|1|A1|U|2445, 6GZZ|1|A1|A|2446, 6GZZ|1|A1|A|2447, 6GZZ|1|A1|A|2453
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6GZZ|1|A1|G|2091
6GZZ|1|A1|U|2092
6GZZ|1|A1|G|2093
6GZZ|1|A1|G|2094
6GZZ|1|A1|A|2095
6GZZ|1|A1|G|2096
6GZZ|1|A1|C|2097
6GZZ|1|A1|U|2098
6GZZ|1|A1|U|2099
6GZZ|1|A1|U|2100
6GZZ|1|A1|A|2101
6GZZ|1|A1|C|2102
6GZZ|1|A1|U|2103
6GZZ|1|A1|G|2104
6GZZ|1|A1|C|2105
6GZZ|1|A1|A|2106
6GZZ|1|A1|G|2107
6GZZ|1|A1|C|2108
6GZZ|1|A1|C|2109
*
6GZZ|1|A1|G|2249
6GZZ|1|A1|C|2250
6GZZ|1|A1|G|2251
6GZZ|1|A1|G|2252
6GZZ|1|A1|G|2253
6GZZ|1|A1|C|2254
6GZZ|1|A1|A|2255
6GZZ|1|A1|G|2256
6GZZ|1|A1|U|2257
6GZZ|1|A1|U|2258
6GZZ|1|A1|U|2259
6GZZ|1|A1|G|2260
*
6GZZ|1|A1|C|2272
6GZZ|1|A1|G|2273
*
6GZZ|1|A1|C|2295
6GZZ|1|A1|G|2296
6GZZ|1|A1|C|2297
*
6GZZ|1|A1|G|2339
6GZZ|1|A1|C|2340
*
6GZZ|1|A1|G|2403
6GZZ|1|A1|U|2404
6GZZ|1|A1|G|2405
6GZZ|1|A1|A|2406
6GZZ|1|A1|A|2407
6GZZ|1|A1|C|2408
6GZZ|1|A1|C|2409
*
6GZZ|1|A1|G|2435
6GZZ|1|A1|A|2436
6GZZ|1|A1|U|2437
6GZZ|1|A1|C|2438
6GZZ|1|A1|A|2439
6GZZ|1|A1|A|2440
6GZZ|1|A1|C|2441
6GZZ|1|A1|G|2442
6GZZ|1|A1|G|2443
6GZZ|1|A1|A|2444
6GZZ|1|A1|U|2445
6GZZ|1|A1|A|2446
6GZZ|1|A1|A|2447
6GZZ|1|A1|A|2448
6GZZ|1|A1|A|2449
6GZZ|1|A1|G|2450
6GZZ|1|A1|U|2451
6GZZ|1|A1|U|2452
6GZZ|1|A1|A|2453
6GZZ|1|A1|C|2454
6GZZ|1|A1|C|2455
6GZZ|1|A1|C|2456
6GZZ|1|A1|C|2457
Current chains
- Chain A1
- 23S ribosomal RNA
Nearby chains
- Chain C1
- 50S ribosomal protein L2
- Chain E1
- 50S ribosomal protein L4
- Chain K1
- 50S ribosomal protein L15
- Chain V1
- 50S ribosomal protein L27
- Chain W1
- 50S ribosomal protein L28
- Chain b1
- 50S ribosomal protein L33
- Chain d1
- 50S ribosomal protein L35
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