J7_6H58_003

3D structure

PDB id

6H58 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1 - Full 100S Hibernating E. coli Ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

7.9 Å

Loop

Sequence

CGACUAAG*UACAAGC*GAACUC*GUAC*GCGCUG*CC*GG

Length

35 nucleotides

Bulged bases

6H58|1|AA|C|2021

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6H58|1|AA|C|8
6H58|1|AA|G|9
6H58|1|AA|A|10
6H58|1|AA|C|11
6H58|1|AA|U|12
6H58|1|AA|A|13
6H58|1|AA|A|14
6H58|1|AA|G|15
*
6H58|1|AA|U|525
6H58|1|AA|A|526
6H58|1|AA|C|527
6H58|1|AA|A|528
6H58|1|AA|A|529
6H58|1|AA|G|530
6H58|1|AA|C|531
*
6H58|1|AA|G|2018
6H58|1|AA|A|2019
6H58|1|AA|A|2020
6H58|1|AA|C|2021
6H58|1|AA|U|2022
6H58|1|AA|C|2023
*
6H58|1|AA|G|2040
6H58|1|AA|U|2041
6H58|1|AA|A|2042
6H58|1|AA|C|2043
*
6H58|1|AA|G|2625
6H58|1|AA|C|2626
6H58|1|AA|G|2627
6H58|1|AA|C|2628
6H58|1|AA|U|2629
6H58|1|AA|G|2630
*
6H58|1|AA|C|2788
6H58|1|AA|C|2789
*
6H58|1|AA|G|2894
6H58|1|AA|G|2895

Current chains

Chain AA

23S ribosomal RNA

Nearby chains

Chain 00

50S ribosomal protein L32

Chain DD

50S ribosomal protein L3

Chain JJ

50S ribosomal protein L13

Chain QQ

50S ribosomal protein L20

Chain SS

50S ribosomal protein L22