J7_6H58_004

3D structure

PDB id

6H58 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1 - Full 100S Hibernating E. coli Ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

7.9 Å

Loop

Sequence

CGAAAG*CGCC*GAGACAC*GAAGAG*CAGAC*GC*GGGUAG

Length

36 nucleotides

Bulged bases

6H58|1|AA|A|945

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6H58|1|AA|C|817
6H58|1|AA|G|818
6H58|1|AA|A|819
6H58|1|AA|A|820
6H58|1|AA|A|821
6H58|1|AA|G|822
*
6H58|1|AA|C|835
6H58|1|AA|G|836
6H58|1|AA|C|837
6H58|1|AA|C|838
*
6H58|1|AA|G|940
6H58|1|AA|A|941
6H58|1|AA|G|942
6H58|1|AA|A|943
6H58|1|AA|C|944
6H58|1|AA|A|945
6H58|1|AA|C|946
*
6H58|1|AA|G|971
6H58|1|AA|A|972
6H58|1|AA|A|973
6H58|1|AA|G|974
6H58|1|AA|A|975
6H58|1|AA|G|976
*
6H58|1|AA|C|987
6H58|1|AA|A|988
6H58|1|AA|G|989
6H58|1|AA|A|990
6H58|1|AA|C|991
*
6H58|1|AA|G|1163
6H58|1|AA|C|1164
*
6H58|1|AA|G|1185
6H58|1|AA|G|1186
6H58|1|AA|G|1187
6H58|1|AA|U|1188
6H58|1|AA|A|1189
6H58|1|AA|G|1190

Current chains

Chain AA

23S ribosomal RNA

Nearby chains

Chain 33

50S ribosomal protein L35

Chain BB

5S ribosomal RNA; 5S rRNA

Chain LL

50S ribosomal protein L15

Chain QQ

50S ribosomal protein L20

Chain RR

50S ribosomal protein L21

Chain ZZ

50S ribosomal protein L30