J7_6HTQ_001

3D structure

PDB id

6HTQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Stringent response control by a bifunctional RelA enzyme in the presence and absence of the ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.5 Å

Loop

Sequence

CCGAAAUAGC*GCUAG*UCAG*CGAAAG*CAGAC*GA*UGGUAGG

Length

39 nucleotides

Bulged bases

6HTQ|1|A|A|991

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6HTQ|1|A|C|863
6HTQ|1|A|C|864
6HTQ|1|A|G|865
6HTQ|1|A|A|866
6HTQ|1|A|A|867
6HTQ|1|A|A|868
6HTQ|1|A|U|869
6HTQ|1|A|A|870
6HTQ|1|A|G|871
6HTQ|1|A|C|872
*
6HTQ|1|A|G|879
6HTQ|1|A|C|880
6HTQ|1|A|U|881
6HTQ|1|A|A|882
6HTQ|1|A|G|883
*
6HTQ|1|A|U|989
6HTQ|1|A|C|990
6HTQ|1|A|A|991
6HTQ|1|A|G|992
*
6HTQ|1|A|C|1017
6HTQ|1|A|G|1018
6HTQ|1|A|A|1019
6HTQ|1|A|A|1020
6HTQ|1|A|A|1021
6HTQ|1|A|G|1022
*
6HTQ|1|A|C|1033
6HTQ|1|A|A|1034
6HTQ|1|A|G|1035
6HTQ|1|A|A|1036
6HTQ|1|A|C|1037
*
6HTQ|1|A|G|1209
6HTQ|1|A|A|1210
*
6HTQ|1|A|U|1226
6HTQ|1|A|G|1227
6HTQ|1|A|G|1228
6HTQ|1|A|U|1229
6HTQ|1|A|A|1230
6HTQ|1|A|G|1231
6HTQ|1|A|G|1232

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 4

50S ribosomal protein L35

Chain B

5S ribosomal RNA; 5S rRNA

Chain L

50S ribosomal protein L15

Chain Q

50S ribosomal protein L20

Chain R

50S ribosomal protein L21

Chain V

50S ribosomal protein L27

Chain Y

50S ribosomal protein L30