J7_6LKQ_001
3D structure
- PDB id
- 6LKQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The Structural Basis for Inhibition of Ribosomal Translocation by Viomycin
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- CGACUAAG*UACAAGC*GAACUC*GUAC*GCGCUG*CC*GG
- Length
- 35 nucleotides
- Bulged bases
- 6LKQ|1|t|C|2021
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6LKQ|1|t|C|8
6LKQ|1|t|G|9
6LKQ|1|t|A|10
6LKQ|1|t|C|11
6LKQ|1|t|U|12
6LKQ|1|t|A|13
6LKQ|1|t|A|14
6LKQ|1|t|G|15
*
6LKQ|1|t|U|525
6LKQ|1|t|A|526
6LKQ|1|t|C|527
6LKQ|1|t|A|528
6LKQ|1|t|A|529
6LKQ|1|t|G|530
6LKQ|1|t|C|531
*
6LKQ|1|t|G|2018
6LKQ|1|t|A|2019
6LKQ|1|t|A|2020
6LKQ|1|t|C|2021
6LKQ|1|t|U|2022
6LKQ|1|t|C|2023
*
6LKQ|1|t|G|2040
6LKQ|1|t|U|2041
6LKQ|1|t|A|2042
6LKQ|1|t|C|2043
*
6LKQ|1|t|G|2625
6LKQ|1|t|C|2626
6LKQ|1|t|G|2627
6LKQ|1|t|C|2628
6LKQ|1|t|U|2629
6LKQ|1|t|G|2630
*
6LKQ|1|t|C|2788
6LKQ|1|t|C|2789
*
6LKQ|1|t|G|2894
6LKQ|1|t|G|2895
Current chains
- Chain t
- 23S ribosomal RNA
Nearby chains
- Chain 0
- 50S ribosomal protein L13
- Chain 8
- 50S ribosomal protein L20
- Chain V
- 50S ribosomal protein L3
- Chain a
- 50S ribosomal protein L22
- Chain i
- 50S ribosomal protein L32
Coloring options: