J7_6LKQ_002
3D structure
- PDB id
- 6LKQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The Structural Basis for Inhibition of Ribosomal Translocation by Viomycin
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- CGAAAG*CGCC*GAGACAC*GAAGAG*CAGAC*GC*GGGUAG
- Length
- 36 nucleotides
- Bulged bases
- 6LKQ|1|t|A|945
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6LKQ|1|t|C|817
6LKQ|1|t|G|818
6LKQ|1|t|A|819
6LKQ|1|t|A|820
6LKQ|1|t|A|821
6LKQ|1|t|G|822
*
6LKQ|1|t|C|835
6LKQ|1|t|G|836
6LKQ|1|t|C|837
6LKQ|1|t|C|838
*
6LKQ|1|t|G|940
6LKQ|1|t|A|941
6LKQ|1|t|G|942
6LKQ|1|t|A|943
6LKQ|1|t|C|944
6LKQ|1|t|A|945
6LKQ|1|t|C|946
*
6LKQ|1|t|G|971
6LKQ|1|t|A|972
6LKQ|1|t|A|973
6LKQ|1|t|G|974
6LKQ|1|t|A|975
6LKQ|1|t|G|976
*
6LKQ|1|t|C|987
6LKQ|1|t|A|988
6LKQ|1|t|G|989
6LKQ|1|t|A|990
6LKQ|1|t|C|991
*
6LKQ|1|t|G|1163
6LKQ|1|t|C|1164
*
6LKQ|1|t|G|1185
6LKQ|1|t|G|1186
6LKQ|1|t|G|1187
6LKQ|1|t|U|1188
6LKQ|1|t|A|1189
6LKQ|1|t|G|1190
Current chains
- Chain t
- 23S ribosomal RNA
Nearby chains
- Chain 2
- 50S ribosomal protein L15
- Chain 8
- 50S ribosomal protein L20
- Chain 9
- 50S ribosomal protein L21
- Chain h
- 50S ribosomal protein L30
- Chain l
- 50S ribosomal protein L35
- Chain u
- 5S ribosomal RNA; 5S rRNA
Coloring options: