J7_6N1D_002
3D structure
- PDB id
- 6N1D (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- X-ray Crystal complex showing Spontaneous Ribosomal Translocation of mRNA and tRNAs into a Chimeric Hybrid State
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.2 Å
Loop
- Sequence
- CGAAAU*AGCC*GAGUGAG*CGAGCGC*GAGAC*GG*CGGUAG
- Length
- 37 nucleotides
- Bulged bases
- 6N1D|1|B23S|A|945, 6N1D|1|B23S|C|974|||A
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6N1D|1|B23S|C|817
6N1D|1|B23S|G|818
6N1D|1|B23S|A|819
6N1D|1|B23S|A|820
6N1D|1|B23S|A|821
6N1D|1|B23S|U|822
*
6N1D|1|B23S|A|835
6N1D|1|B23S|G|836
6N1D|1|B23S|C|837
6N1D|1|B23S|C|838
*
6N1D|1|B23S|G|940
6N1D|1|B23S|A|941
6N1D|1|B23S|G|942
6N1D|1|B23S|U|943
6N1D|1|B23S|G|944
6N1D|1|B23S|A|945
6N1D|1|B23S|G|946
*
6N1D|1|B23S|C|971
6N1D|1|B23S|G|972
6N1D|1|B23S|A|973
6N1D|1|B23S|G|974
6N1D|1|B23S|C|974|||A
6N1D|1|B23S|G|975
6N1D|1|B23S|C|976
*
6N1D|1|B23S|G|987
6N1D|1|B23S|A|988
6N1D|1|B23S|G|989
6N1D|1|B23S|A|990
6N1D|1|B23S|C|991
*
6N1D|1|B23S|G|1163
6N1D|1|B23S|G|1164
*
6N1D|1|B23S|C|1185
6N1D|1|B23S|G|1186
6N1D|1|B23S|G|1187
6N1D|1|B23S|U|1188
6N1D|1|B23S|A|1189
6N1D|1|B23S|G|1190
Current chains
- Chain B23S
- 23S rRNA
Nearby chains
- Chain B5S
- 5S ribosomal RNA; 5S rRNA
- Chain BL15
- 50S ribosomal protein L15
- Chain BL20
- 50S ribosomal protein L20
- Chain BL21
- 50S ribosomal protein L21
- Chain BL30
- 50S ribosomal protein L30
- Chain BL35
- 50S ribosomal protein L35
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