3D structure

PDB id
6OST (explore in PDB, NAKB, or RNA 3D Hub)
Description
RF2 pre-accommodated state bound Release complex 70S at 24ms
Experimental method
ELECTRON MICROSCOPY
Resolution
4.2 Å

Loop

Sequence
CGACUAAG*UACAAGC*GAACUC*GUAC*GCGCUG*CC*GG
Length
35 nucleotides
Bulged bases
6OST|1|1|C|2021
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6OST|1|1|C|8
6OST|1|1|G|9
6OST|1|1|A|10
6OST|1|1|C|11
6OST|1|1|U|12
6OST|1|1|A|13
6OST|1|1|A|14
6OST|1|1|G|15
*
6OST|1|1|U|525
6OST|1|1|A|526
6OST|1|1|C|527
6OST|1|1|A|528
6OST|1|1|A|529
6OST|1|1|G|530
6OST|1|1|C|531
*
6OST|1|1|G|2018
6OST|1|1|A|2019
6OST|1|1|A|2020
6OST|1|1|C|2021
6OST|1|1|U|2022
6OST|1|1|C|2023
*
6OST|1|1|G|2040
6OST|1|1|U|2041
6OST|1|1|A|2042
6OST|1|1|C|2043
*
6OST|1|1|G|2625
6OST|1|1|C|2626
6OST|1|1|G|2627
6OST|1|1|C|2628
6OST|1|1|U|2629
6OST|1|1|G|2630
*
6OST|1|1|C|2788
6OST|1|1|C|2789
*
6OST|1|1|G|2894
6OST|1|1|G|2895

Current chains

Chain 1
23S Ribosomal RNA

Nearby chains

Chain C
50S ribosomal protein L3
Chain J
50S ribosomal protein L13
Chain Q
50S ribosomal protein L20
Chain S
50S ribosomal protein L22
Chain b
50S ribosomal protein L32

Coloring options:

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