3D structure

PDB id
6OST (explore in PDB, NAKB, or RNA 3D Hub)
Description
RF2 pre-accommodated state bound Release complex 70S at 24ms
Experimental method
ELECTRON MICROSCOPY
Resolution
4.2 Å

Loop

Sequence
CGAAAG*CGC*GACAC*GAAGAG*CAGAC*GC*GGGUAG
Length
33 nucleotides
Bulged bases
6OST|1|1|A|945
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6OST|1|1|C|817
6OST|1|1|G|818
6OST|1|1|A|819
6OST|1|1|A|820
6OST|1|1|A|821
6OST|1|1|G|822
*
6OST|1|1|C|835
6OST|1|1|G|836
6OST|1|1|C|837
*
6OST|1|1|G|942
6OST|1|1|A|943
6OST|1|1|C|944
6OST|1|1|A|945
6OST|1|1|C|946
*
6OST|1|1|G|971
6OST|1|1|A|972
6OST|1|1|A|973
6OST|1|1|G|974
6OST|1|1|A|975
6OST|1|1|G|976
*
6OST|1|1|C|987
6OST|1|1|A|988
6OST|1|1|G|989
6OST|1|1|A|990
6OST|1|1|C|991
*
6OST|1|1|G|1163
6OST|1|1|C|1164
*
6OST|1|1|G|1185
6OST|1|1|G|1186
6OST|1|1|G|1187
6OST|1|1|U|1188
6OST|1|1|A|1189
6OST|1|1|G|1190

Current chains

Chain 1
23S Ribosomal RNA

Nearby chains

Chain 3
5S ribosomal RNA; 5S rRNA
Chain L
50S ribosomal protein L15
Chain Q
50S ribosomal protein L20
Chain R
50S ribosomal protein L21
Chain Z
50S ribosomal protein L30
Chain e
50S ribosomal protein L35

Coloring options:

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