J7_6U48_001
3D structure
- PDB id
- 6U48 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 50S with phazolicin (PHZ) bound in exit tunnel
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.87 Å
Loop
- Sequence
- CGACUAAG*UACAAGC*GAACUC*GUAC*GCGCUG*CC*GG
- Length
- 35 nucleotides
- Bulged bases
- 6U48|1|CA|C|2021
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6U48|1|CA|C|8
6U48|1|CA|G|9
6U48|1|CA|A|10
6U48|1|CA|C|11
6U48|1|CA|U|12
6U48|1|CA|A|13
6U48|1|CA|A|14
6U48|1|CA|G|15
*
6U48|1|CA|U|525
6U48|1|CA|A|526
6U48|1|CA|C|527
6U48|1|CA|A|528
6U48|1|CA|A|529
6U48|1|CA|G|530
6U48|1|CA|C|531
*
6U48|1|CA|G|2018
6U48|1|CA|A|2019
6U48|1|CA|A|2020
6U48|1|CA|C|2021
6U48|1|CA|U|2022
6U48|1|CA|C|2023
*
6U48|1|CA|G|2040
6U48|1|CA|U|2041
6U48|1|CA|A|2042
6U48|1|CA|C|2043
*
6U48|1|CA|G|2625
6U48|1|CA|C|2626
6U48|1|CA|G|2627
6U48|1|CA|C|2628
6U48|1|CA|U|2629
6U48|1|CA|G|2630
*
6U48|1|CA|C|2788
6U48|1|CA|C|2789
*
6U48|1|CA|G|2894
6U48|1|CA|G|2895
Current chains
- Chain CA
- 23S rRNA
Nearby chains
- Chain C1
- 50S ribosomal protein bL32
- Chain CD
- 50S ribosomal protein uL3
- Chain CK
- 50S ribosomal protein uL13
- Chain CR
- 50S ribosomal protein bL20
- Chain CS
- 50S ribosomal protein bL21
- Chain CT
- 50S ribosomal protein uL22
Coloring options: