J7_6U48_002
3D structure
- PDB id
- 6U48 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 50S with phazolicin (PHZ) bound in exit tunnel
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.87 Å
Loop
- Sequence
- CGAAAG*CGCC*GAGACAC*GAAGAG*CAGAC*GC*GGGUAG
- Length
- 36 nucleotides
- Bulged bases
- 6U48|1|CA|A|945
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6U48|1|CA|C|817
6U48|1|CA|G|818
6U48|1|CA|A|819
6U48|1|CA|A|820
6U48|1|CA|A|821
6U48|1|CA|G|822
*
6U48|1|CA|C|835
6U48|1|CA|G|836
6U48|1|CA|C|837
6U48|1|CA|C|838
*
6U48|1|CA|G|940
6U48|1|CA|A|941
6U48|1|CA|G|942
6U48|1|CA|A|943
6U48|1|CA|C|944
6U48|1|CA|A|945
6U48|1|CA|C|946
*
6U48|1|CA|G|971
6U48|1|CA|A|972
6U48|1|CA|A|973
6U48|1|CA|G|974
6U48|1|CA|A|975
6U48|1|CA|G|976
*
6U48|1|CA|C|987
6U48|1|CA|A|988
6U48|1|CA|G|989
6U48|1|CA|A|990
6U48|1|CA|C|991
*
6U48|1|CA|G|1163
6U48|1|CA|C|1164
*
6U48|1|CA|G|1185
6U48|1|CA|G|1186
6U48|1|CA|G|1187
6U48|1|CA|U|1188
6U48|1|CA|A|1189
6U48|1|CA|G|1190
Current chains
- Chain CA
- 23S rRNA
Nearby chains
- Chain C0
- 50S ribosomal protein uL30
- Chain C4
- 50S ribosomal protein bL35
- Chain CB
- 5S ribosomal RNA; 5S rRNA
- Chain CM
- 50S ribosomal protein uL15
- Chain CR
- 50S ribosomal protein bL20
- Chain CS
- 50S ribosomal protein bL21
Coloring options: