3D structure

PDB id
6W6P (explore in PDB, NAKB, or RNA 3D Hub)
Description
MultiBody Refinement of 70S Ribosome from Enterococcus faecalis
Experimental method
ELECTRON MICROSCOPY
Resolution
2.9 Å

Loop

Sequence
CGAAAU*AG*UCAG*CGAAAG*CAGAC*GA*UGGUAG
Length
31 nucleotides
Bulged bases
6W6P|1|A|A|985
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6W6P|1|A|C|857
6W6P|1|A|G|858
6W6P|1|A|A|859
6W6P|1|A|A|860
6W6P|1|A|A|861
6W6P|1|A|U|862
*
6W6P|1|A|A|875
6W6P|1|A|G|876
*
6W6P|1|A|U|983
6W6P|1|A|C|984
6W6P|1|A|A|985
6W6P|1|A|G|986
*
6W6P|1|A|C|1011
6W6P|1|A|G|1012
6W6P|1|A|A|1013
6W6P|1|A|A|1014
6W6P|1|A|A|1015
6W6P|1|A|G|1016
*
6W6P|1|A|C|1027
6W6P|1|A|A|1028
6W6P|1|A|G|1029
6W6P|1|A|A|1030
6W6P|1|A|C|1031
*
6W6P|1|A|G|1203
6W6P|1|A|A|1204
*
6W6P|1|A|U|1223
6W6P|1|A|G|1224
6W6P|1|A|G|1225
6W6P|1|A|U|1226
6W6P|1|A|A|1227
6W6P|1|A|G|1228

Current chains

Chain A
23S rRNA

Nearby chains

Chain 0
50S ribosomal protein L30
Chain 5
50S ribosomal protein L35
Chain B
5S ribosomal RNA; 5S rRNA
Chain M
50S ribosomal protein L15
Chain R
50S ribosomal protein L20
Chain S
50S ribosomal protein L21

Coloring options:

Copyright 2026 BGSU RNA group. Page generated in 0.121 s