Loop J7_6WQQ

3D structure

PDB id: 6WQQ (explore in PDB, NAKB, or RNA 3D Hub)
Description: Structure of the 50S subunit of the ribosome from Methicillin Resistant Staphylococcus aureus in complex with the antibiotic, radezolid
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å

Loop

Sequence: UUAUUAAG*UACAAGU*AUAGUA*UUAC*GCGUAG*CCAACUUCGGUUAUAAG*CGAAGA
Length: 54 nucleotides
Bulged bases: 6WQQ|1|1|G|575, 6WQQ|1|1|G|2048, 6WQQ|1|1|C|2822
QA status: Valid loop

Sequence variability

R3DSVS

Structural variability across Equivalence Class

R3DMCS EC

Structural variability across Rfam

R3DMCS Rfam

Detailed Annotation: No text annotation
Broad Annotation: No text annotation
Motif group: Not in a motif group
Basepair signature: Not available
Number of instances in this motif group: 0

Unit IDs

6WQQ|1|1|U|8
6WQQ|1|1|U|9
6WQQ|1|1|A|10
6WQQ|1|1|U|11
6WQQ|1|1|U|12
6WQQ|1|1|A|13
6WQQ|1|1|A|14
6WQQ|1|1|G|15
*
6WQQ|1|1|U|570
6WQQ|1|1|A|571
6WQQ|1|1|C|572
6WQQ|1|1|A|573
6WQQ|1|1|A|574
6WQQ|1|1|G|575
6WQQ|1|1|U|576
*
6WQQ|1|1|A|2045
6WQQ|1|1|U|2046
6WQQ|1|1|A|2047
6WQQ|1|1|G|2048
6WQQ|1|1|U|2049
6WQQ|1|1|A|2050
*
6WQQ|1|1|U|2067
6WQQ|1|1|U|2068
6WQQ|1|1|A|2069
6WQQ|1|1|C|2070
*
6WQQ|1|1|G|2652
6WQQ|1|1|C|2653
6WQQ|1|1|G|2654
6WQQ|1|1|U|2655
6WQQ|1|1|A|2656
6WQQ|1|1|G|2657
*
6WQQ|1|1|C|2815
6WQQ|1|1|C|2816
6WQQ|1|1|A|2817
6WQQ|1|1|A|2818
6WQQ|1|1|C|2819
6WQQ|1|1|U|2820
6WQQ|1|1|U|2821
6WQQ|1|1|C|2822
6WQQ|1|1|G|2823
6WQQ|1|1|G|2824
6WQQ|1|1|U|2825
6WQQ|1|1|U|2826
6WQQ|1|1|A|2827
6WQQ|1|1|U|2828
6WQQ|1|1|A|2829
6WQQ|1|1|A|2830
6WQQ|1|1|G|2831
*
6WQQ|1|1|C|2909
6WQQ|1|1|G|2910
6WQQ|1|1|A|2911
6WQQ|1|1|A|2912
6WQQ|1|1|G|2913
6WQQ|1|1|A|2914

Current chains

Chain 1: 23S rRNA

Nearby chains

Chain C: 50S ribosomal protein L20
Chain E: 50S ribosomal protein L22
Chain L: 50S ribosomal protein L3
Chain N: 50S ribosomal protein L32
Chain V: 50S ribosomal protein L13

J7_6WQQ_001