J7_6ZU5_001

3D structure

PDB id

6ZU5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Paranosema locustae ribosome in complex with Lso2

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CAC*GCG*CCC*GA*UG*CACUG*CGCAG

Length

23 nucleotides

Bulged bases

6ZU5|1|L50|C|453, 6ZU5|1|L50|C|468

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6ZU5|1|L50|C|4
6ZU5|1|L50|A|5
6ZU5|1|L50|C|6
*
6ZU5|1|L50|G|452
6ZU5|1|L50|C|453
6ZU5|1|L50|G|454
*
6ZU5|1|L50|C|467
6ZU5|1|L50|C|468
6ZU5|1|L50|C|469
*
6ZU5|1|L50|G|484
6ZU5|1|L50|A|485
*
6ZU5|1|L50|U|1150
6ZU5|1|L50|G|1151
*
6ZU5|1|L50|C|1829
6ZU5|1|L50|A|1830
6ZU5|1|L50|C|1831
6ZU5|1|L50|U|1832
6ZU5|1|L50|G|1833
*
6ZU5|1|L50|C|1852
6ZU5|1|L50|G|1853
6ZU5|1|L50|C|1854
6ZU5|1|L50|A|1855
6ZU5|1|L50|G|1856

Current chains

Chain L50

25S rRNA

Nearby chains

Chain LC0

uL4

Chain LEE

eL32

Chain LFF

eL33

Chain LO0

uL13

Chain LP0

uL22