3D structure

PDB id
7ACJ (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of translocated trans-translation complex on E. coli stalled ribosome.
Experimental method
ELECTRON MICROSCOPY
Resolution
3.2 Å

Loop

Sequence
CGACUAAG*UACAAGC*GAACUC*GUAC*GCGCUG*CC*GG
Length
35 nucleotides
Bulged bases
7ACJ|1|1|U|12, 7ACJ|1|1|C|2021
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7ACJ|1|1|C|8
7ACJ|1|1|G|9
7ACJ|1|1|A|10
7ACJ|1|1|C|11
7ACJ|1|1|U|12
7ACJ|1|1|A|13
7ACJ|1|1|A|14
7ACJ|1|1|G|15
*
7ACJ|1|1|U|525
7ACJ|1|1|A|526
7ACJ|1|1|C|527
7ACJ|1|1|A|528
7ACJ|1|1|A|529
7ACJ|1|1|G|530
7ACJ|1|1|C|531
*
7ACJ|1|1|G|2018
7ACJ|1|1|A|2019
7ACJ|1|1|A|2020
7ACJ|1|1|C|2021
7ACJ|1|1|U|2022
7ACJ|1|1|C|2023
*
7ACJ|1|1|G|2040
7ACJ|1|1|U|2041
7ACJ|1|1|A|2042
7ACJ|1|1|C|2043
*
7ACJ|1|1|G|2625
7ACJ|1|1|C|2626
7ACJ|1|1|G|2627
7ACJ|1|1|C|2628
7ACJ|1|1|U|2629
7ACJ|1|1|G|2630
*
7ACJ|1|1|C|2788
7ACJ|1|1|C|2789
*
7ACJ|1|1|G|2894
7ACJ|1|1|G|2895

Current chains

Chain 1
23S ribosomal RNA

Nearby chains

Chain C
50S ribosomal protein L3
Chain J
50S ribosomal protein L13
Chain Q
50S ribosomal protein L20
Chain S
50S ribosomal protein L22
Chain b
50S ribosomal protein L32

Coloring options:

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