3D structure

PDB id
7ACJ (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of translocated trans-translation complex on E. coli stalled ribosome.
Experimental method
ELECTRON MICROSCOPY
Resolution
3.2 Å

Loop

Sequence
CGAAAG*CGCC*GAGACAC*GAAGAG*CAGAC*GC*GGGUAG
Length
36 nucleotides
Bulged bases
7ACJ|1|1|A|945
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7ACJ|1|1|C|817
7ACJ|1|1|G|818
7ACJ|1|1|A|819
7ACJ|1|1|A|820
7ACJ|1|1|A|821
7ACJ|1|1|G|822
*
7ACJ|1|1|C|835
7ACJ|1|1|G|836
7ACJ|1|1|C|837
7ACJ|1|1|C|838
*
7ACJ|1|1|G|940
7ACJ|1|1|A|941
7ACJ|1|1|G|942
7ACJ|1|1|A|943
7ACJ|1|1|C|944
7ACJ|1|1|A|945
7ACJ|1|1|C|946
*
7ACJ|1|1|G|971
7ACJ|1|1|A|972
7ACJ|1|1|A|973
7ACJ|1|1|G|974
7ACJ|1|1|A|975
7ACJ|1|1|G|976
*
7ACJ|1|1|C|987
7ACJ|1|1|A|988
7ACJ|1|1|G|989
7ACJ|1|1|A|990
7ACJ|1|1|C|991
*
7ACJ|1|1|G|1163
7ACJ|1|1|C|1164
*
7ACJ|1|1|G|1185
7ACJ|1|1|G|1186
7ACJ|1|1|G|1187
7ACJ|1|1|U|1188
7ACJ|1|1|A|1189
7ACJ|1|1|G|1190

Current chains

Chain 1
23S ribosomal RNA

Nearby chains

Chain 3
5S ribosomal RNA; 5S rRNA
Chain L
50S ribosomal protein L15
Chain Q
50S ribosomal protein L20
Chain R
50S ribosomal protein L21
Chain Z
50S ribosomal protein L30
Chain e
50S ribosomal protein L35

Coloring options:

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