J7_7ASO_002
3D structure
- PDB id
- 7ASO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus 70S after 30 minutes incubation at 37C
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.11 Å
Loop
- Sequence
- CGAAAU*AG*UCAG*CGAAAG*CAGACCACCA*UGUGGAU*AUGGUAG
- Length
- 42 nucleotides
- Bulged bases
- 7ASO|1|Y|A|989, 7ASO|1|Y|C|1039
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7ASO|1|Y|C|862
7ASO|1|Y|G|863
7ASO|1|Y|A|864
7ASO|1|Y|A|865
7ASO|1|Y|A|866
7ASO|1|Y|U|867
*
7ASO|1|Y|A|880
7ASO|1|Y|G|881
*
7ASO|1|Y|U|987
7ASO|1|Y|C|988
7ASO|1|Y|A|989
7ASO|1|Y|G|990
*
7ASO|1|Y|C|1015
7ASO|1|Y|G|1016
7ASO|1|Y|A|1017
7ASO|1|Y|A|1018
7ASO|1|Y|A|1019
7ASO|1|Y|G|1020
*
7ASO|1|Y|C|1031
7ASO|1|Y|A|1032
7ASO|1|Y|G|1033
7ASO|1|Y|A|1034
7ASO|1|Y|C|1035
7ASO|1|Y|C|1036
7ASO|1|Y|A|1037
7ASO|1|Y|C|1038
7ASO|1|Y|C|1039
7ASO|1|Y|A|1040
*
7ASO|1|Y|U|1203
7ASO|1|Y|G|1204
7ASO|1|Y|U|1205
7ASO|1|Y|G|1206
7ASO|1|Y|G|1207
7ASO|1|Y|A|1208
7ASO|1|Y|U|1209
*
7ASO|1|Y|A|1223
7ASO|1|Y|U|1224
7ASO|1|Y|G|1225
7ASO|1|Y|G|1226
7ASO|1|Y|U|1227
7ASO|1|Y|A|1228
7ASO|1|Y|G|1229
Current chains
- Chain Y
- 23S
Nearby chains
- Chain C
- 5S ribosomal RNA; 5S rRNA
- Chain M
- 50S ribosomal protein L13
- Chain O
- 50S ribosomal protein L15
- Chain S
- 50S ribosomal protein L20
- Chain U
- 50S ribosomal protein L21
- Chain f
- 50S ribosomal protein L30
- Chain j
- 50S ribosomal protein L35
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