Loop J7_7ASO

3D structure

PDB id: 7ASO (explore in PDB, NAKB, or RNA 3D Hub)
Description: Staphylococcus aureus 70S after 30 minutes incubation at 37C
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.11 Å

Loop

Sequence: UUUA*UUUG*CG*CGC*GUAA*UAGUGAUCC*GCUCAACGGAUAAAA
Length: 41 nucleotides
Bulged bases: 7ASO|1|Y|U|2103, 7ASO|1|Y|U|2417, 7ASO|1|Y|G|2455, 7ASO|1|Y|A|2457, 7ASO|1|Y|U|2458, 7ASO|1|Y|A|2460
QA status: Valid loop

Sequence variability

R3DSVS

Structural variability across Equivalence Class

R3DMCS EC

Structural variability across Rfam

R3DMCS Rfam

Detailed Annotation: No text annotation
Broad Annotation: No text annotation
Motif group: Not in a motif group
Basepair signature: Not available
Number of instances in this motif group: 0

Unit IDs

7ASO|1|Y|U|2101
7ASO|1|Y|U|2102
7ASO|1|Y|U|2103
7ASO|1|Y|A|2104
*
7ASO|1|Y|U|2270
7ASO|1|Y|U|2271
7ASO|1|Y|U|2272
7ASO|1|Y|G|2273
*
7ASO|1|Y|C|2285
7ASO|1|Y|G|2286
*
7ASO|1|Y|C|2308
7ASO|1|Y|G|2309
7ASO|1|Y|C|2310
*
7ASO|1|Y|G|2352
7ASO|1|Y|U|2353
7ASO|1|Y|A|2354
7ASO|1|Y|A|2355
*
7ASO|1|Y|U|2414
7ASO|1|Y|A|2415
7ASO|1|Y|G|2416
7ASO|1|Y|U|2417
7ASO|1|Y|G|2418
7ASO|1|Y|A|2419
7ASO|1|Y|U|2420
7ASO|1|Y|C|2421
7ASO|1|Y|C|2422
*
7ASO|1|Y|G|2448
7ASO|1|Y|C|2449
7ASO|1|Y|U|2450
7ASO|1|Y|C|2451
7ASO|1|Y|A|2452
7ASO|1|Y|A|2453
7ASO|1|Y|C|2454
7ASO|1|Y|G|2455
7ASO|1|Y|G|2456
7ASO|1|Y|A|2457
7ASO|1|Y|U|2458
7ASO|1|Y|A|2459
7ASO|1|Y|A|2460
7ASO|1|Y|A|2461
7ASO|1|Y|A|2462

Current chains

Chain Y: 23S

Nearby chains

Chain O: 50S ribosomal protein L15
Chain T: 50S ribosomal protein L33
Chain b: 50S ribosomal protein L27
Chain c: 50S ribosomal protein L28
Chain j: 50S ribosomal protein L35

J7_7ASO_003