J7_7BL6_001

3D structure

PDB id

7BL6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S-ObgE-GMPPNP particle

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

CGACUAAG*UACAAGC*GAACUC*GUAC*GCGCUG*CC*GG

Length

35 nucleotides

Bulged bases

7BL6|1|A|C|2021

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7BL6|1|A|C|8
7BL6|1|A|G|9
7BL6|1|A|A|10
7BL6|1|A|C|11
7BL6|1|A|U|12
7BL6|1|A|A|13
7BL6|1|A|A|14
7BL6|1|A|G|15
*
7BL6|1|A|U|525
7BL6|1|A|A|526
7BL6|1|A|C|527
7BL6|1|A|A|528
7BL6|1|A|A|529
7BL6|1|A|G|530
7BL6|1|A|C|531
*
7BL6|1|A|G|2018
7BL6|1|A|A|2019
7BL6|1|A|A|2020
7BL6|1|A|C|2021
7BL6|1|A|U|2022
7BL6|1|A|C|2023
*
7BL6|1|A|G|2040
7BL6|1|A|U|2041
7BL6|1|A|A|2042
7BL6|1|A|C|2043
*
7BL6|1|A|G|2625
7BL6|1|A|C|2626
7BL6|1|A|G|2627
7BL6|1|A|C|2628
7BL6|1|A|U|2629
7BL6|1|A|G|2630
*
7BL6|1|A|C|2788
7BL6|1|A|C|2789
*
7BL6|1|A|G|2894
7BL6|1|A|G|2895

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 0

50S ribosomal protein L32

Chain D

50S ribosomal protein L3

Chain J

50S ribosomal protein L13

Chain Q

50S ribosomal protein L20

Chain S

50S ribosomal protein L22