3D structure

PDB id
7BL6 (explore in PDB, NAKB, or RNA 3D Hub)
Description
50S-ObgE-GMPPNP particle
Experimental method
ELECTRON MICROSCOPY
Resolution
4 Å

Loop

Sequence
CGAAAG*CGCC*GAGACAC*GAAGAG*CAGAC*GC*GGGUAG
Length
36 nucleotides
Bulged bases
7BL6|1|A|A|945
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7BL6|1|A|C|817
7BL6|1|A|G|818
7BL6|1|A|A|819
7BL6|1|A|A|820
7BL6|1|A|A|821
7BL6|1|A|G|822
*
7BL6|1|A|C|835
7BL6|1|A|G|836
7BL6|1|A|C|837
7BL6|1|A|C|838
*
7BL6|1|A|G|940
7BL6|1|A|A|941
7BL6|1|A|G|942
7BL6|1|A|A|943
7BL6|1|A|C|944
7BL6|1|A|A|945
7BL6|1|A|C|946
*
7BL6|1|A|G|971
7BL6|1|A|A|972
7BL6|1|A|A|973
7BL6|1|A|G|974
7BL6|1|A|A|975
7BL6|1|A|G|976
*
7BL6|1|A|C|987
7BL6|1|A|A|988
7BL6|1|A|G|989
7BL6|1|A|A|990
7BL6|1|A|C|991
*
7BL6|1|A|G|1163
7BL6|1|A|C|1164
*
7BL6|1|A|G|1185
7BL6|1|A|G|1186
7BL6|1|A|G|1187
7BL6|1|A|U|1188
7BL6|1|A|A|1189
7BL6|1|A|G|1190

Current chains

Chain A
23S ribosomal RNA

Nearby chains

Chain 3
50S ribosomal protein L35
Chain B
5S ribosomal RNA; 5S rRNA
Chain L
50S ribosomal protein L15
Chain Q
50S ribosomal protein L20
Chain R
50S ribosomal protein L21
Chain Z
50S ribosomal protein L30

Coloring options:

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