3D structure

PDB id
7MSM (explore in PDB, NAKB, or RNA 3D Hub)
Description
Mtb 70SIC in complex with MtbEttA at Trans_R0 state
Experimental method
ELECTRON MICROSCOPY
Resolution
2.79 Å

Loop

Sequence
CCGAAAU*AG*UGAG*CGAAAG*CAGAU*GC*GGGUAGG
Length
33 nucleotides
Bulged bases
7MSM|1|A|A|1073
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7MSM|1|A|C|945
7MSM|1|A|C|946
7MSM|1|A|G|947
7MSM|1|A|A|948
7MSM|1|A|A|949
7MSM|1|A|A|950
7MSM|1|A|U|951
*
7MSM|1|A|A|964
7MSM|1|A|G|965
*
7MSM|1|A|U|1071
7MSM|1|A|G|1072
7MSM|1|A|A|1073
7MSM|1|A|G|1074
*
7MSM|1|A|C|1100
7MSM|1|A|G|1101
7MSM|1|A|A|1102
7MSM|1|A|A|1103
7MSM|1|A|A|1104
7MSM|1|A|G|1105
*
7MSM|1|A|C|1116
7MSM|1|A|A|1117
7MSM|1|A|G|1118
7MSM|1|A|A|1119
7MSM|1|A|U|1120
*
7MSM|1|A|G|1293
7MSM|1|A|C|1294
*
7MSM|1|A|G|1317
7MSM|1|A|G|1318
7MSM|1|A|G|1319
7MSM|1|A|U|1320
7MSM|1|A|A|1321
7MSM|1|A|G|1322
7MSM|1|A|G|1323

Current chains

Chain A
23S rRNA

Nearby chains

Chain 3
50S ribosomal protein L35
Chain 7
50S ribosomal protein L37
Chain B
5S ribosomal RNA; 5S rRNA
Chain L
50S ribosomal protein L15
Chain Q
50S ribosomal protein L20
Chain R
50S ribosomal protein L21
Chain Z
50S ribosomal protein L30

Coloring options:

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