J7_7N2C_001

3D structure

PDB id

7N2C (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating 70S ribosome complex in a fusidic acid-stalled intermediate state of translocation bound to EF-G(GDP) (INT2)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.72 Å

Loop

Sequence

CGACUAAG*UACAAGC*GAACUC*GUAC*GCGCUG*CC*GG

Length

35 nucleotides

Bulged bases

7N2C|1|23|C|2021

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7N2C|1|23|C|8
7N2C|1|23|G|9
7N2C|1|23|A|10
7N2C|1|23|C|11
7N2C|1|23|U|12
7N2C|1|23|A|13
7N2C|1|23|A|14
7N2C|1|23|G|15
*
7N2C|1|23|U|525
7N2C|1|23|A|526
7N2C|1|23|C|527
7N2C|1|23|A|528
7N2C|1|23|A|529
7N2C|1|23|G|530
7N2C|1|23|C|531
*
7N2C|1|23|G|2018
7N2C|1|23|A|2019
7N2C|1|23|A|2020
7N2C|1|23|C|2021
7N2C|1|23|U|2022
7N2C|1|23|C|2023
*
7N2C|1|23|G|2040
7N2C|1|23|U|2041
7N2C|1|23|A|2042
7N2C|1|23|C|2043
*
7N2C|1|23|G|2625
7N2C|1|23|C|2626
7N2C|1|23|G|2627
7N2C|1|23|C|2628
7N2C|1|23|U|2629
7N2C|1|23|G|2630
*
7N2C|1|23|C|2788
7N2C|1|23|C|2789
*
7N2C|1|23|G|2894
7N2C|1|23|G|2895

Current chains

Chain 23

23S rRNA

Nearby chains

Chain LC

50S ribosomal protein L3

Chain LM

50S ribosomal protein L13

Chain LT

50S ribosomal protein L20

Chain LV

50S ribosomal protein L22

Chain Lf

50S ribosomal protein L32