J7_7NWG_002
3D structure
- PDB id
- 7NWG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian pre-termination 80S ribosome with Hybrid P/E- and A/P-site tRNA's bound by Blasticidin S.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- CAUGUCUAAG*CUGCGAAUGGCUCAUUAAAUC*GCCC*GGUGAC*GAGAG*CACAU*AAGGCAG
- Length
- 58 nucleotides
- Bulged bases
- 7NWG|1|A2|C|58, 7NWG|1|A2|U|59, 7NWG|1|A2|A|92, 7NWG|1|A2|G|407, 7NWG|1|A2|C|472
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7NWG|1|A2|C|53
7NWG|1|A2|A|54
7NWG|1|A2|U|55
7NWG|1|A2|G|56
7NWG|1|A2|U|57
7NWG|1|A2|C|58
7NWG|1|A2|U|59
7NWG|1|A2|A|60
7NWG|1|A2|A|61
7NWG|1|A2|G|62
*
7NWG|1|A2|C|86
7NWG|1|A2|U|87
7NWG|1|A2|G|88
7NWG|1|A2|C|89
7NWG|1|A2|G|90
7NWG|1|A2|A|91
7NWG|1|A2|A|92
7NWG|1|A2|U|93
7NWG|1|A2|G|94
7NWG|1|A2|G|95
7NWG|1|A2|C|96
7NWG|1|A2|U|97
7NWG|1|A2|C|98
7NWG|1|A2|A|99
7NWG|1|A2|U|100
7NWG|1|A2|U|101
7NWG|1|A2|A|102
7NWG|1|A2|A|103
7NWG|1|A2|A|104
7NWG|1|A2|U|105
7NWG|1|A2|C|106
*
7NWG|1|A2|G|355
7NWG|1|A2|C|356
7NWG|1|A2|C|357
7NWG|1|A2|C|358
*
7NWG|1|A2|G|404
7NWG|1|A2|G|405
7NWG|1|A2|U|406
7NWG|1|A2|G|407
7NWG|1|A2|A|408
7NWG|1|A2|C|409
*
7NWG|1|A2|G|432
7NWG|1|A2|A|433
7NWG|1|A2|G|434
7NWG|1|A2|A|435
7NWG|1|A2|G|436
*
7NWG|1|A2|C|457
7NWG|1|A2|A|458
7NWG|1|A2|C|459
7NWG|1|A2|A|460
7NWG|1|A2|U|461
*
7NWG|1|A2|A|468
7NWG|1|A2|A|469
7NWG|1|A2|G|470
7NWG|1|A2|G|471
7NWG|1|A2|C|472
7NWG|1|A2|A|473
7NWG|1|A2|G|474
Current chains
- Chain A2
- 18S Ribosomal RNA
Nearby chains
- Chain F2
- S4
- Chain H2
- 40S ribosomal protein S6
- Chain J2
- 40S ribosomal protein S8
- Chain K2
- 40S ribosomal protein S9
- Chain M2
- 40S ribosomal protein S11
- Chain V3
- eL14
- Chain Y2
- Ribosomal protein S23
- Chain Z2
- 40S ribosomal protein S24
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