J7_7OSA_001
3D structure
- PDB id
- 7OSA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- CGAAGU*AG*UGGG*CGAUGC*GAACG*CC*GAGUAG
- Length
- 31 nucleotides
- Bulged bases
- 7OSA|1|25S|G|1116
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7OSA|1|25S|C|949
7OSA|1|25S|G|950
7OSA|1|25S|A|951
7OSA|1|25S|A|952
7OSA|1|25S|G|953
7OSA|1|25S|U|954
*
7OSA|1|25S|A|967
7OSA|1|25S|G|968
*
7OSA|1|25S|U|1114
7OSA|1|25S|G|1115
7OSA|1|25S|G|1116
7OSA|1|25S|G|1117
*
7OSA|1|25S|C|1141
7OSA|1|25S|G|1142
7OSA|1|25S|A|1143
7OSA|1|25S|U|1144
7OSA|1|25S|G|1145
7OSA|1|25S|C|1146
*
7OSA|1|25S|G|1157
7OSA|1|25S|A|1158
7OSA|1|25S|A|1159
7OSA|1|25S|C|1160
7OSA|1|25S|G|1161
*
7OSA|1|25S|C|1338
7OSA|1|25S|C|1339
*
7OSA|1|25S|G|1365
7OSA|1|25S|A|1366
7OSA|1|25S|G|1367
7OSA|1|25S|U|1368
7OSA|1|25S|A|1369
7OSA|1|25S|G|1370
Current chains
- Chain 25S
- 25S rRNA
Nearby chains
- Chain AB
- 5S ribosomal RNA; 5S rRNA
- Chain eL13
- 60S ribosomal protein L13
- Chain eL18
- BJ4_G0033900.mRNA.1.CDS.1
- Chain eL21
- BJ4_G0003770.mRNA.1.CDS.1
- Chain eL29
- 60S ribosomal protein L29
- Chain eL32
- HN1_G0013350.mRNA.1.CDS.1
- Chain eL33
- BJ4_G0025510.mRNA.1.CDS.1
- Chain uL15
- 60S ribosomal protein L28
- Chain uL30
- 60S ribosomal protein L7-A
- Chain uL4
- BJ4_G0008850.mRNA.1.CDS.1
Coloring options: