3D structure

PDB id
7P7R (explore in PDB, NAKB, or RNA 3D Hub)
Description
PoxtA-EQ2 antibiotic resistance ABCF bound to E. faecalis 70S ribosome, state I
Experimental method
ELECTRON MICROSCOPY
Resolution
2.9 Å

Loop

Sequence
UGAAUAAG*UACAACA*UUAGUA*UUAC*GCGUUG*CC*GA
Length
35 nucleotides
Bulged bases
None detected
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7P7R|1|A|U|8
7P7R|1|A|G|9
7P7R|1|A|A|10
7P7R|1|A|A|11
7P7R|1|A|U|12
7P7R|1|A|A|13
7P7R|1|A|A|14
7P7R|1|A|G|15
*
7P7R|1|A|U|563
7P7R|1|A|A|564
7P7R|1|A|C|565
7P7R|1|A|A|566
7P7R|1|A|A|567
7P7R|1|A|C|568
7P7R|1|A|A|569
*
7P7R|1|A|U|2031
7P7R|1|A|U|2032
7P7R|1|A|A|2033
7P7R|1|A|G|2034
7P7R|1|A|U|2035
7P7R|1|A|A|2036
*
7P7R|1|A|U|2053
7P7R|1|A|U|2054
7P7R|1|A|A|2055
7P7R|1|A|C|2056
*
7P7R|1|A|G|2638
7P7R|1|A|C|2639
7P7R|1|A|G|2640
7P7R|1|A|U|2641
7P7R|1|A|U|2642
7P7R|1|A|G|2643
*
7P7R|1|A|C|2801
7P7R|1|A|C|2802
*
7P7R|1|A|G|2903
7P7R|1|A|A|2904

Current chains

Chain A
23S rRNA

Nearby chains

Chain 4
50S ribosomal protein L32-3
Chain H
50S ribosomal protein L3
Chain M
50S ribosomal protein L13
Chain T
50S ribosomal protein L20
Chain V
50S ribosomal protein L22

Coloring options:

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