Loop J7_7PHC

3D structure

PDB id: 7PHC (explore in PDB, NAKB, or RNA 3D Hub)
Description: 70S ribosome with A*- and P/E-site tRNAs in chloramphenicol-treated Mycoplasma pneumoniae cells
Experimental method: ELECTRON MICROSCOPY
Resolution: 9.9 Å

Loop

Sequence: UGCAAG*CGAACGGGUGAGUAACACGUAU*GUGCGCC*GUAG*CCACAA*UAC*GCAGCA
Length: 54 nucleotides
Bulged bases: 7PHC|1|5|A|94, 7PHC|1|5|A|349
QA status: Unknown status

Sequence variability

R3DSVS

Structural variability across Equivalence Class

R3DMCS EC

Structural variability across Rfam

R3DMCS Rfam

Detailed Annotation: No text annotation
Broad Annotation: No text annotation
Motif group: Not in a motif group
Basepair signature: Not available
Number of instances in this motif group: 0

Unit IDs

7PHC|1|5|U|57
7PHC|1|5|G|58
7PHC|1|5|C|59
7PHC|1|5|A|60
7PHC|1|5|A|61
7PHC|1|5|G|62
*
7PHC|1|5|C|91
7PHC|1|5|G|92
7PHC|1|5|A|93
7PHC|1|5|A|94
7PHC|1|5|C|95
7PHC|1|5|G|96
7PHC|1|5|G|97
7PHC|1|5|G|98
7PHC|1|5|U|99
7PHC|1|5|G|100
7PHC|1|5|A|101
7PHC|1|5|G|102
7PHC|1|5|U|103
7PHC|1|5|A|104
7PHC|1|5|A|105
7PHC|1|5|C|106
7PHC|1|5|A|107
7PHC|1|5|C|108
7PHC|1|5|G|109
7PHC|1|5|U|110
7PHC|1|5|A|111
7PHC|1|5|U|112
*
7PHC|1|5|G|230
7PHC|1|5|U|231
7PHC|1|5|G|232
7PHC|1|5|C|233
7PHC|1|5|G|234
7PHC|1|5|C|235
7PHC|1|5|C|236
*
7PHC|1|5|G|282
7PHC|1|5|U|283
7PHC|1|5|A|284
7PHC|1|5|G|285
*
7PHC|1|5|C|307
7PHC|1|5|C|308
7PHC|1|5|A|309
7PHC|1|5|C|310
7PHC|1|5|A|311
7PHC|1|5|A|312
*
7PHC|1|5|U|333
7PHC|1|5|A|334
7PHC|1|5|C|335
*
7PHC|1|5|G|347
7PHC|1|5|C|348
7PHC|1|5|A|349
7PHC|1|5|G|350
7PHC|1|5|C|351
7PHC|1|5|A|352

Current chains

Chain 5: 16S ribosomal RNA

Nearby chains

Chain K: 30S ribosomal protein S12
Chain O: 30S ribosomal protein S16
Chain P: 30S ribosomal protein S17
Chain S: 30S ribosomal protein S20
Chain j: 50S ribosomal protein L14

J7_7PHC_002