3D structure

PDB id
7PHC (explore in PDB, NAKB, or RNA 3D Hub)
Description
70S ribosome with A*- and P/E-site tRNAs in chloramphenicol-treated Mycoplasma pneumoniae cells
Experimental method
ELECTRON MICROSCOPY
Resolution
9.9 Å

Loop

Sequence
CGAAAU*AG*UCAG*CAAGAGG*CAGAU*GA*UGGUAG
Length
32 nucleotides
Bulged bases
7PHC|1|3|A|981
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7PHC|1|3|C|852
7PHC|1|3|G|853
7PHC|1|3|A|854
7PHC|1|3|A|855
7PHC|1|3|A|856
7PHC|1|3|U|857
*
7PHC|1|3|A|870
7PHC|1|3|G|871
*
7PHC|1|3|U|979
7PHC|1|3|C|980
7PHC|1|3|A|981
7PHC|1|3|G|982
*
7PHC|1|3|C|1007
7PHC|1|3|A|1008
7PHC|1|3|A|1009
7PHC|1|3|G|1010
7PHC|1|3|A|1011
7PHC|1|3|G|1012
7PHC|1|3|G|1013
*
7PHC|1|3|C|1023
7PHC|1|3|A|1024
7PHC|1|3|G|1025
7PHC|1|3|A|1026
7PHC|1|3|U|1027
*
7PHC|1|3|G|1198
7PHC|1|3|A|1199
*
7PHC|1|3|U|1216
7PHC|1|3|G|1217
7PHC|1|3|G|1218
7PHC|1|3|U|1219
7PHC|1|3|A|1220
7PHC|1|3|G|1221

Current chains

Chain 3
23S ribosomal RNA

Nearby chains

Chain 1
50S ribosomal protein L35
Chain k
50S ribosomal protein L15
Chain p
50S ribosomal protein L20
Chain q
50S ribosomal protein L21

Coloring options:

Copyright 2026 BGSU RNA group. Page generated in 0.6005 s