Loop J7_7PIR

3D structure

PDB id: 7PIR (explore in PDB, NAKB, or RNA 3D Hub)
Description: 70S ribosome with A*- and P/E-site tRNAs in pseudouridimycin-treated Mycoplasma pneumoniae cells
Experimental method: ELECTRON MICROSCOPY
Resolution: 12.1 Å

Loop

Sequence: CGUCGAAAU*AGCG*CAGUCAG*CAAGAG*CAGAU*GAUAA*UGUGGUAGACG
Length: 47 nucleotides
Bulged bases: 7PIR|1|3|A|981
QA status: Unknown status

Sequence variability

R3DSVS

Structural variability across Equivalence Class

R3DMCS EC

Structural variability across Rfam

R3DMCS Rfam

Detailed Annotation: No text annotation
Broad Annotation: No text annotation
Motif group: Not in a motif group
Basepair signature: Not available
Number of instances in this motif group: 0

Unit IDs

7PIR|1|3|C|849
7PIR|1|3|G|850
7PIR|1|3|U|851
7PIR|1|3|C|852
7PIR|1|3|G|853
7PIR|1|3|A|854
7PIR|1|3|A|855
7PIR|1|3|A|856
7PIR|1|3|U|857
*
7PIR|1|3|A|870
7PIR|1|3|G|871
7PIR|1|3|C|872
7PIR|1|3|G|873
*
7PIR|1|3|C|976
7PIR|1|3|A|977
7PIR|1|3|G|978
7PIR|1|3|U|979
7PIR|1|3|C|980
7PIR|1|3|A|981
7PIR|1|3|G|982
*
7PIR|1|3|C|1007
7PIR|1|3|A|1008
7PIR|1|3|A|1009
7PIR|1|3|G|1010
7PIR|1|3|A|1011
7PIR|1|3|G|1012
*
7PIR|1|3|C|1023
7PIR|1|3|A|1024
7PIR|1|3|G|1025
7PIR|1|3|A|1026
7PIR|1|3|U|1027
*
7PIR|1|3|G|1198
7PIR|1|3|A|1199
7PIR|1|3|U|1200
7PIR|1|3|A|1201
7PIR|1|3|A|1202
*
7PIR|1|3|U|1214
7PIR|1|3|G|1215
7PIR|1|3|U|1216
7PIR|1|3|G|1217
7PIR|1|3|G|1218
7PIR|1|3|U|1219
7PIR|1|3|A|1220
7PIR|1|3|G|1221
7PIR|1|3|A|1222
7PIR|1|3|C|1223
7PIR|1|3|G|1224

Current chains

Chain 3: 23S ribosomal RNA

Nearby chains

Chain 1: 50S ribosomal protein L35
Chain k: 50S ribosomal protein L15
Chain p: 50S ribosomal protein L20
Chain q: 50S ribosomal protein L21

J7_7PIR_002