3D structure

PDB id
7PJZ (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the 70S-EF-G-GDP ribosome complex with tRNAs in chimeric state 2 (CHI2-EF-G-GDP)
Experimental method
ELECTRON MICROSCOPY
Resolution
6 Å

Loop

Sequence
CGAAAG*CGCC*GAGACAC*GAAGAG*CAGAC*GC*GGGUAG
Length
36 nucleotides
Bulged bases
7PJZ|1|A|A|945
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7PJZ|1|A|C|817
7PJZ|1|A|G|818
7PJZ|1|A|A|819
7PJZ|1|A|A|820
7PJZ|1|A|A|821
7PJZ|1|A|G|822
*
7PJZ|1|A|C|835
7PJZ|1|A|G|836
7PJZ|1|A|C|837
7PJZ|1|A|C|838
*
7PJZ|1|A|G|940
7PJZ|1|A|A|941
7PJZ|1|A|G|942
7PJZ|1|A|A|943
7PJZ|1|A|C|944
7PJZ|1|A|A|945
7PJZ|1|A|C|946
*
7PJZ|1|A|G|971
7PJZ|1|A|A|972
7PJZ|1|A|A|973
7PJZ|1|A|G|974
7PJZ|1|A|A|975
7PJZ|1|A|G|976
*
7PJZ|1|A|C|987
7PJZ|1|A|A|988
7PJZ|1|A|G|989
7PJZ|1|A|A|990
7PJZ|1|A|C|991
*
7PJZ|1|A|G|1163
7PJZ|1|A|C|1164
*
7PJZ|1|A|G|1185
7PJZ|1|A|G|1186
7PJZ|1|A|G|1187
7PJZ|1|A|U|1188
7PJZ|1|A|A|1189
7PJZ|1|A|G|1190

Current chains

Chain A
23S ribosomal RNA

Nearby chains

Chain 3
50S ribosomal protein L35
Chain B
5S ribosomal RNA; 5S rRNA
Chain L
50S ribosomal protein L15
Chain Q
50S ribosomal protein L20
Chain R
50S ribosomal protein L21
Chain Z
50S ribosomal protein L30

Coloring options:

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