3D structure

PDB id
7PJZ (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the 70S-EF-G-GDP ribosome complex with tRNAs in chimeric state 2 (CHI2-EF-G-GDP)
Experimental method
ELECTRON MICROSCOPY
Resolution
6 Å

Loop

Sequence
CGACUAAG*UACAAGC*GAACUC*GUAC*GCGCUG*CC*GG
Length
35 nucleotides
Bulged bases
7PJZ|1|A|C|2021
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7PJZ|1|A|C|8
7PJZ|1|A|G|9
7PJZ|1|A|A|10
7PJZ|1|A|C|11
7PJZ|1|A|U|12
7PJZ|1|A|A|13
7PJZ|1|A|A|14
7PJZ|1|A|G|15
*
7PJZ|1|A|U|525
7PJZ|1|A|A|526
7PJZ|1|A|C|527
7PJZ|1|A|A|528
7PJZ|1|A|A|529
7PJZ|1|A|G|530
7PJZ|1|A|C|531
*
7PJZ|1|A|G|2018
7PJZ|1|A|A|2019
7PJZ|1|A|A|2020
7PJZ|1|A|C|2021
7PJZ|1|A|U|2022
7PJZ|1|A|C|2023
*
7PJZ|1|A|G|2040
7PJZ|1|A|U|2041
7PJZ|1|A|A|2042
7PJZ|1|A|C|2043
*
7PJZ|1|A|G|2625
7PJZ|1|A|C|2626
7PJZ|1|A|G|2627
7PJZ|1|A|C|2628
7PJZ|1|A|U|2629
7PJZ|1|A|G|2630
*
7PJZ|1|A|C|2788
7PJZ|1|A|C|2789
*
7PJZ|1|A|G|2894
7PJZ|1|A|G|2895

Current chains

Chain A
23S ribosomal RNA

Nearby chains

Chain 0
50S ribosomal protein L32
Chain D
50S ribosomal protein L3
Chain J
50S ribosomal protein L13
Chain Q
50S ribosomal protein L20
Chain R
50S ribosomal protein L21
Chain S
50S ribosomal protein L22

Coloring options:

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