J7_7QG8_001

3D structure

PDB id

7QG8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the collided E. coli disome - VemP-stalled 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.97 Å

Loop

Sequence

CGACUAAG*UACAAGC*GAACUC*GUAC*GCGCUG*CC*GG

Length

35 nucleotides

Bulged bases

7QG8|1|N|C|2021

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7QG8|1|N|C|8
7QG8|1|N|G|9
7QG8|1|N|A|10
7QG8|1|N|C|11
7QG8|1|N|U|12
7QG8|1|N|A|13
7QG8|1|N|A|14
7QG8|1|N|G|15
*
7QG8|1|N|U|525
7QG8|1|N|A|526
7QG8|1|N|C|527
7QG8|1|N|A|528
7QG8|1|N|A|529
7QG8|1|N|G|530
7QG8|1|N|C|531
*
7QG8|1|N|G|2018
7QG8|1|N|A|2019
7QG8|1|N|A|2020
7QG8|1|N|C|2021
7QG8|1|N|U|2022
7QG8|1|N|C|2023
*
7QG8|1|N|G|2040
7QG8|1|N|U|2041
7QG8|1|N|A|2042
7QG8|1|N|C|2043
*
7QG8|1|N|G|2625
7QG8|1|N|C|2626
7QG8|1|N|G|2627
7QG8|1|N|C|2628
7QG8|1|N|U|2629
7QG8|1|N|G|2630
*
7QG8|1|N|C|2788
7QG8|1|N|C|2789
*
7QG8|1|N|G|2894
7QG8|1|N|G|2895

Current chains

Chain N

23S rRNA

Nearby chains

Chain Q

50S ribosomal protein L3

Chain W

50S ribosomal protein L13

Chain d

50S ribosomal protein L20

Chain f

50S ribosomal protein L22

Chain n

50S ribosomal protein L32