3D structure

PDB id
7QG8 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the collided E. coli disome - VemP-stalled 70S ribosome
Experimental method
ELECTRON MICROSCOPY
Resolution
3.97 Å

Loop

Sequence
CGAAAG*CGCC*GAGACAC*GAAGAG*CAGAC*GC*GGGUAG
Length
36 nucleotides
Bulged bases
7QG8|1|N|A|945
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7QG8|1|N|C|817
7QG8|1|N|G|818
7QG8|1|N|A|819
7QG8|1|N|A|820
7QG8|1|N|A|821
7QG8|1|N|G|822
*
7QG8|1|N|C|835
7QG8|1|N|G|836
7QG8|1|N|C|837
7QG8|1|N|C|838
*
7QG8|1|N|G|940
7QG8|1|N|A|941
7QG8|1|N|G|942
7QG8|1|N|A|943
7QG8|1|N|C|944
7QG8|1|N|A|945
7QG8|1|N|C|946
*
7QG8|1|N|G|971
7QG8|1|N|A|972
7QG8|1|N|A|973
7QG8|1|N|G|974
7QG8|1|N|A|975
7QG8|1|N|G|976
*
7QG8|1|N|C|987
7QG8|1|N|A|988
7QG8|1|N|G|989
7QG8|1|N|A|990
7QG8|1|N|C|991
*
7QG8|1|N|G|1163
7QG8|1|N|C|1164
*
7QG8|1|N|G|1185
7QG8|1|N|G|1186
7QG8|1|N|G|1187
7QG8|1|N|U|1188
7QG8|1|N|A|1189
7QG8|1|N|G|1190

Current chains

Chain N
23S rRNA

Nearby chains

Chain O
5S ribosomal RNA; 5S rRNA
Chain Y
50S ribosomal protein L15
Chain d
50S ribosomal protein L20
Chain e
50S ribosomal protein L21
Chain m
50S ribosomal protein L30
Chain q
50S ribosomal protein L35

Coloring options:

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