J7_7QGH_001

3D structure

PDB id

7QGH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the E. coli disome - collided 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.48 Å

Loop

Sequence

CGACUAAG*UACAAGC*GAACUC*GUAC*GCGCUG*CC*GG

Length

35 nucleotides

Bulged bases

7QGH|1|N|C|2021

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7QGH|1|N|C|8
7QGH|1|N|G|9
7QGH|1|N|A|10
7QGH|1|N|C|11
7QGH|1|N|U|12
7QGH|1|N|A|13
7QGH|1|N|A|14
7QGH|1|N|G|15
*
7QGH|1|N|U|525
7QGH|1|N|A|526
7QGH|1|N|C|527
7QGH|1|N|A|528
7QGH|1|N|A|529
7QGH|1|N|G|530
7QGH|1|N|C|531
*
7QGH|1|N|G|2018
7QGH|1|N|A|2019
7QGH|1|N|A|2020
7QGH|1|N|C|2021
7QGH|1|N|U|2022
7QGH|1|N|C|2023
*
7QGH|1|N|G|2040
7QGH|1|N|U|2041
7QGH|1|N|A|2042
7QGH|1|N|C|2043
*
7QGH|1|N|G|2625
7QGH|1|N|C|2626
7QGH|1|N|G|2627
7QGH|1|N|C|2628
7QGH|1|N|U|2629
7QGH|1|N|G|2630
*
7QGH|1|N|C|2788
7QGH|1|N|C|2789
*
7QGH|1|N|G|2894
7QGH|1|N|G|2895

Current chains

Chain N

23S rRNA

Nearby chains

Chain Q

50S ribosomal protein L3

Chain W

50S ribosomal protein L13

Chain d

50S ribosomal protein L20

Chain f

50S ribosomal protein L22

Chain n

50S ribosomal protein L32