J7_7QGR_001

3D structure

PDB id

7QGR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the SmrB-bound E. coli disome - collided 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

5.7 Å

Loop

Sequence

CGACUAAG*UACAAGC*GAACUC*GUAC*GCGCUG*CC*GG

Length

35 nucleotides

Bulged bases

7QGR|1|N|C|2021

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7QGR|1|N|C|8
7QGR|1|N|G|9
7QGR|1|N|A|10
7QGR|1|N|C|11
7QGR|1|N|U|12
7QGR|1|N|A|13
7QGR|1|N|A|14
7QGR|1|N|G|15
*
7QGR|1|N|U|525
7QGR|1|N|A|526
7QGR|1|N|C|527
7QGR|1|N|A|528
7QGR|1|N|A|529
7QGR|1|N|G|530
7QGR|1|N|C|531
*
7QGR|1|N|G|2018
7QGR|1|N|A|2019
7QGR|1|N|A|2020
7QGR|1|N|C|2021
7QGR|1|N|U|2022
7QGR|1|N|C|2023
*
7QGR|1|N|G|2040
7QGR|1|N|U|2041
7QGR|1|N|A|2042
7QGR|1|N|C|2043
*
7QGR|1|N|G|2625
7QGR|1|N|C|2626
7QGR|1|N|G|2627
7QGR|1|N|C|2628
7QGR|1|N|U|2629
7QGR|1|N|G|2630
*
7QGR|1|N|C|2788
7QGR|1|N|C|2789
*
7QGR|1|N|G|2894
7QGR|1|N|G|2895

Current chains

Chain N

23S rRNA

Nearby chains

Chain Q

50S ribosomal protein L3

Chain W

50S ribosomal protein L13

Chain d

50S ribosomal protein L20

Chain f

50S ribosomal protein L22

Chain n

50S ribosomal protein L32