3D structure

PDB id
7QGR (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the SmrB-bound E. coli disome - collided 70S ribosome
Experimental method
ELECTRON MICROSCOPY
Resolution
5.7 Å

Loop

Sequence
CGAAAG*CGCC*GAGACAC*GAAGAG*CAGAC*GC*GGGUAG
Length
36 nucleotides
Bulged bases
7QGR|1|N|A|945
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7QGR|1|N|C|817
7QGR|1|N|G|818
7QGR|1|N|A|819
7QGR|1|N|A|820
7QGR|1|N|A|821
7QGR|1|N|G|822
*
7QGR|1|N|C|835
7QGR|1|N|G|836
7QGR|1|N|C|837
7QGR|1|N|C|838
*
7QGR|1|N|G|940
7QGR|1|N|A|941
7QGR|1|N|G|942
7QGR|1|N|A|943
7QGR|1|N|C|944
7QGR|1|N|A|945
7QGR|1|N|C|946
*
7QGR|1|N|G|971
7QGR|1|N|A|972
7QGR|1|N|A|973
7QGR|1|N|G|974
7QGR|1|N|A|975
7QGR|1|N|G|976
*
7QGR|1|N|C|987
7QGR|1|N|A|988
7QGR|1|N|G|989
7QGR|1|N|A|990
7QGR|1|N|C|991
*
7QGR|1|N|G|1163
7QGR|1|N|C|1164
*
7QGR|1|N|G|1185
7QGR|1|N|G|1186
7QGR|1|N|G|1187
7QGR|1|N|U|1188
7QGR|1|N|A|1189
7QGR|1|N|G|1190

Current chains

Chain N
23S rRNA

Nearby chains

Chain O
5S ribosomal RNA; 5S rRNA
Chain Y
50S ribosomal protein L15
Chain d
50S ribosomal protein L20
Chain e
50S ribosomal protein L21
Chain m
50S ribosomal protein L30
Chain q
50S ribosomal protein L35

Coloring options:

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