3D structure

PDB id
7QWQ (explore in PDB, NAKB, or RNA 3D Hub)
Description
Ternary complex of ribosome nascent chain with SRP and NAC
Experimental method
ELECTRON MICROSCOPY
Resolution
2.83 Å

Loop

Sequence
CGAAGU*AG*UGGG*CGCUGC*GAACG*CC*GAGUAG
Length
31 nucleotides
Bulged bases
7QWQ|1|5|G|1854
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7QWQ|1|5|C|1666
7QWQ|1|5|G|1667
7QWQ|1|5|A|1668
7QWQ|1|5|A|1669
7QWQ|1|5|G|1670
7QWQ|1|5|U|1671
*
7QWQ|1|5|A|1684
7QWQ|1|5|G|1685
*
7QWQ|1|5|U|1852
7QWQ|1|5|G|1853
7QWQ|1|5|G|1854
7QWQ|1|5|G|1855
*
7QWQ|1|5|C|1879
7QWQ|1|5|G|1880
7QWQ|1|5|C|1881
7QWQ|1|5|U|1882
7QWQ|1|5|G|1883
7QWQ|1|5|C|1884
*
7QWQ|1|5|G|1895
7QWQ|1|5|A|1896
7QWQ|1|5|A|1897
7QWQ|1|5|C|1898
7QWQ|1|5|G|1899
*
7QWQ|1|5|C|2077
7QWQ|1|5|C|2078
*
7QWQ|1|5|G|2278
7QWQ|1|5|A|2279
7QWQ|1|5|G|2280
7QWQ|1|5|U|2281
7QWQ|1|5|A|2282
7QWQ|1|5|G|2283

Current chains

Chain 5
28S rRNA

Nearby chains

Chain 7
5S ribosomal RNA; 5S rRNA
Chain C
60S ribosomal protein L4
Chain F
uL30
Chain L
60S ribosomal protein L13
Chain Q
eL18
Chain T
60S ribosomal protein L21
Chain a
60S ribosomal protein L27a
Chain b
60S ribosomal protein L29
Chain e
Ribosomal protein L32
Chain f
60S ribosomal protein L35a

Coloring options:

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