3D structure

PDB id
7QWR (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the ribosome-nascent chain containing an ER signal sequence in complex with NAC
Experimental method
ELECTRON MICROSCOPY
Resolution
2.9 Å

Loop

Sequence
CGAAGU*AG*UGGG*CGCUGC*GAACG*CC*GAGUAG
Length
31 nucleotides
Bulged bases
7QWR|1|5|G|1854
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7QWR|1|5|C|1666
7QWR|1|5|G|1667
7QWR|1|5|A|1668
7QWR|1|5|A|1669
7QWR|1|5|G|1670
7QWR|1|5|U|1671
*
7QWR|1|5|A|1684
7QWR|1|5|G|1685
*
7QWR|1|5|U|1852
7QWR|1|5|G|1853
7QWR|1|5|G|1854
7QWR|1|5|G|1855
*
7QWR|1|5|C|1879
7QWR|1|5|G|1880
7QWR|1|5|C|1881
7QWR|1|5|U|1882
7QWR|1|5|G|1883
7QWR|1|5|C|1884
*
7QWR|1|5|G|1895
7QWR|1|5|A|1896
7QWR|1|5|A|1897
7QWR|1|5|C|1898
7QWR|1|5|G|1899
*
7QWR|1|5|C|2077
7QWR|1|5|C|2078
*
7QWR|1|5|G|2278
7QWR|1|5|A|2279
7QWR|1|5|G|2280
7QWR|1|5|U|2281
7QWR|1|5|A|2282
7QWR|1|5|G|2283

Current chains

Chain 5
28S rRNA

Nearby chains

Chain 7
5S ribosomal RNA; 5S rRNA
Chain C
60S ribosomal protein L4
Chain F
uL30
Chain L
L13
Chain Q
eL18
Chain T
60S ribosomal protein L21
Chain a
60S ribosomal protein L27a
Chain b
60S ribosomal protein L29
Chain e
Ribosomal protein L32
Chain f
60S ribosomal protein L35a

Coloring options:

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