J7_7RQB_002
3D structure
- PDB id
- 7RQB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, A-site aminoacyl-tRNA analog ACC-PMN, and P-site MAI-tripeptidyl-tRNA analog ACCA-IAM at 2.45A resolution
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.45 Å
Loop
- Sequence
- CGAAAU*AG*UGAG*CGAGCGC*GAGAC*GG*CGGUAG
- Length
- 32 nucleotides
- Bulged bases
- 7RQB|1|1A|A|945, 7RQB|1|1A|C|975
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J7_21233.3
- Basepair signature
- cWW-tSH-tHW-cSH-tHH-tHS-F-cWW-cWW-cWW-cWW-F-tSH-cWW-tHS-F-cWW
- Number of instances in this motif group
- 3
Unit IDs
7RQB|1|1A|C|817
7RQB|1|1A|G|818
7RQB|1|1A|A|819
7RQB|1|1A|A|820
7RQB|1|1A|A|821
7RQB|1|1A|U|822
*
7RQB|1|1A|A|835
7RQB|1|1A|G|836
*
7RQB|1|1A|U|943
7RQB|1|1A|G|944
7RQB|1|1A|A|945
7RQB|1|1A|G|946
*
7RQB|1|1A|C|971
7RQB|1|1A|G|972
7RQB|1|1A|A|973
7RQB|1|1A|G|974
7RQB|1|1A|C|975
7RQB|1|1A|G|975|||A
7RQB|1|1A|C|976
*
7RQB|1|1A|G|987
7RQB|1|1A|A|988
7RQB|1|1A|G|989
7RQB|1|1A|A|990
7RQB|1|1A|C|991
*
7RQB|1|1A|G|1163
7RQB|1|1A|G|1164
*
7RQB|1|1A|C|1185
7RQB|1|1A|G|1186
7RQB|1|1A|G|1187
7RQB|1|1A|U|1188
7RQB|1|1A|A|1189
7RQB|1|1A|G|1190
Current chains
- Chain 1A
- 23S Ribosomal RNA
Nearby chains
- Chain 13
- 50S ribosomal protein L30
- Chain 18
- 50S ribosomal protein L35
- Chain 1B
- 5S ribosomal RNA; 5S rRNA
- Chain 1P
- 50S ribosomal protein L15
- Chain 1U
- 50S ribosomal protein L20
- Chain 1V
- 50S ribosomal protein L21
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