3D structure

PDB id
7S1H (explore in PDB, NAKB, or RNA 3D Hub)
Description
Wild-type Escherichia coli ribosome with antibiotic linezolid
Experimental method
ELECTRON MICROSCOPY
Resolution
2.35 Å

Loop

Sequence
CGACUAAG*UACAAGC*GAACUC*GUAC*GCGCUG*CC*GG
Length
35 nucleotides
Bulged bases
7S1H|1|I|C|2021
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7S1H|1|I|C|8
7S1H|1|I|G|9
7S1H|1|I|A|10
7S1H|1|I|C|11
7S1H|1|I|U|12
7S1H|1|I|A|13
7S1H|1|I|A|14
7S1H|1|I|G|15
*
7S1H|1|I|U|525
7S1H|1|I|A|526
7S1H|1|I|C|527
7S1H|1|I|A|528
7S1H|1|I|A|529
7S1H|1|I|G|530
7S1H|1|I|C|531
*
7S1H|1|I|G|2018
7S1H|1|I|A|2019
7S1H|1|I|A|2020
7S1H|1|I|C|2021
7S1H|1|I|U|2022
7S1H|1|I|C|2023
*
7S1H|1|I|G|2040
7S1H|1|I|U|2041
7S1H|1|I|A|2042
7S1H|1|I|C|2043
*
7S1H|1|I|G|2625
7S1H|1|I|C|2626
7S1H|1|I|G|2627
7S1H|1|I|C|2628
7S1H|1|I|U|2629
7S1H|1|I|G|2630
*
7S1H|1|I|C|2788
7S1H|1|I|C|2789
*
7S1H|1|I|G|2894
7S1H|1|I|G|2895

Current chains

Chain I
23S rRNA

Nearby chains

Chain L
50S ribosomal protein L3
Chain R
50S ribosomal protein L13
Chain Y
50S ribosomal protein L20
Chain a
50S ribosomal protein L22
Chain i
50S ribosomal protein L32

Coloring options:

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