J7_7TOQ_001
3D structure
- PDB id
- 7TOQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein poly-PR
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CGAAGU*AG*UGGG*CGCUGC*GAACG*CC*GAGUAG
- Length
- 31 nucleotides
- Bulged bases
- 7TOQ|1|A25S|G|1854
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7TOQ|1|A25S|C|1666
7TOQ|1|A25S|G|1667
7TOQ|1|A25S|A|1668
7TOQ|1|A25S|A|1669
7TOQ|1|A25S|G|1670
7TOQ|1|A25S|U|1671
*
7TOQ|1|A25S|A|1684
7TOQ|1|A25S|G|1685
*
7TOQ|1|A25S|U|1852
7TOQ|1|A25S|G|1853
7TOQ|1|A25S|G|1854
7TOQ|1|A25S|G|1855
*
7TOQ|1|A25S|C|1879
7TOQ|1|A25S|G|1880
7TOQ|1|A25S|C|1881
7TOQ|1|A25S|U|1882
7TOQ|1|A25S|G|1883
7TOQ|1|A25S|C|1884
*
7TOQ|1|A25S|G|1895
7TOQ|1|A25S|A|1896
7TOQ|1|A25S|A|1897
7TOQ|1|A25S|C|1898
7TOQ|1|A25S|G|1899
*
7TOQ|1|A25S|C|2077
7TOQ|1|A25S|C|2078
*
7TOQ|1|A25S|G|2278
7TOQ|1|A25S|A|2279
7TOQ|1|A25S|G|2280
7TOQ|1|A25S|U|2281
7TOQ|1|A25S|A|2282
7TOQ|1|A25S|G|2283
Current chains
- Chain A25S
- 28S rRNA
Nearby chains
- Chain A5S
- 5S ribosomal RNA; 5S rRNA
- Chain AL04
- 60S ribosomal protein L4
- Chain AL07
- uL30
- Chain AL13
- eL13
- Chain AL18
- eL18
- Chain AL21
- 60S ribosomal protein L21
- Chain AL28
- 60S ribosomal protein L27a
- Chain AL29
- eL29
- Chain AL32
- 60S ribosomal protein L32
- Chain AL33
- 60S ribosomal protein L35a
Coloring options: