3D structure

PDB id
7UNU (explore in PDB, NAKB, or RNA 3D Hub)
Description
Pseudomonas aeruginosa 70S ribosome initiation complex bound to compact IF2-GDP (composite structure I-B)
Experimental method
ELECTRON MICROSCOPY
Resolution
2.9 Å

Loop

Sequence
UGAAGAAG*UACAAGC*GAAAUC*GUAU*ACGUUU*AC*GG
Length
35 nucleotides
Bulged bases
7UNU|1|A|A|2008
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7UNU|1|A|U|8
7UNU|1|A|G|9
7UNU|1|A|A|10
7UNU|1|A|A|11
7UNU|1|A|G|12
7UNU|1|A|A|13
7UNU|1|A|A|14
7UNU|1|A|G|15
*
7UNU|1|A|U|516
7UNU|1|A|A|517
7UNU|1|A|C|518
7UNU|1|A|A|519
7UNU|1|A|A|520
7UNU|1|A|G|521
7UNU|1|A|C|522
*
7UNU|1|A|G|2005
7UNU|1|A|A|2006
7UNU|1|A|A|2007
7UNU|1|A|A|2008
7UNU|1|A|U|2009
7UNU|1|A|C|2010
*
7UNU|1|A|G|2027
7UNU|1|A|U|2028
7UNU|1|A|A|2029
7UNU|1|A|U|2030
*
7UNU|1|A|A|2612
7UNU|1|A|C|2613
7UNU|1|A|G|2614
7UNU|1|A|U|2615
7UNU|1|A|U|2616
7UNU|1|A|U|2617
*
7UNU|1|A|A|2775
7UNU|1|A|C|2776
*
7UNU|1|A|G|2881
7UNU|1|A|G|2882

Current chains

Chain A
23S Ribosomal RNA

Nearby chains

Chain 4
50S ribosomal protein L32
Chain D
50S ribosomal protein L3
Chain L
50S ribosomal protein L13
Chain S
50S ribosomal protein L20
Chain U
50S ribosomal protein L22

Coloring options:

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