3D structure

PDB id
7UNU (explore in PDB, NAKB, or RNA 3D Hub)
Description
Pseudomonas aeruginosa 70S ribosome initiation complex bound to compact IF2-GDP (composite structure I-B)
Experimental method
ELECTRON MICROSCOPY
Resolution
2.9 Å

Loop

Sequence
CGAAAG*CGCC*GAGACAC*GAAAAG*CAGAC*GG*CGGUAG
Length
36 nucleotides
Bulged bases
7UNU|1|A|A|935
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7UNU|1|A|C|807
7UNU|1|A|G|808
7UNU|1|A|A|809
7UNU|1|A|A|810
7UNU|1|A|A|811
7UNU|1|A|G|812
*
7UNU|1|A|C|825
7UNU|1|A|G|826
7UNU|1|A|C|827
7UNU|1|A|C|828
*
7UNU|1|A|G|930
7UNU|1|A|A|931
7UNU|1|A|G|932
7UNU|1|A|A|933
7UNU|1|A|C|934
7UNU|1|A|A|935
7UNU|1|A|C|936
*
7UNU|1|A|G|961
7UNU|1|A|A|962
7UNU|1|A|A|963
7UNU|1|A|A|964
7UNU|1|A|A|965
7UNU|1|A|G|966
*
7UNU|1|A|C|977
7UNU|1|A|A|978
7UNU|1|A|G|979
7UNU|1|A|A|980
7UNU|1|A|C|981
*
7UNU|1|A|G|1154
7UNU|1|A|G|1155
*
7UNU|1|A|C|1172
7UNU|1|A|G|1173
7UNU|1|A|G|1174
7UNU|1|A|U|1175
7UNU|1|A|A|1176
7UNU|1|A|G|1177

Current chains

Chain A
23S Ribosomal RNA

Nearby chains

Chain 2
50S ribosomal protein L30
Chain 7
50S ribosomal protein L35
Chain B
5S ribosomal RNA; 5S rRNA
Chain N
50S ribosomal protein L15
Chain S
50S ribosomal protein L20
Chain T
50S ribosomal protein L21

Coloring options:

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