3D structure

PDB id
7UNV (explore in PDB, NAKB, or RNA 3D Hub)
Description
Pseudomonas aeruginosa 70S ribosome initiation complex bound to IF2-GDPCP (structure II-A)
Experimental method
ELECTRON MICROSCOPY
Resolution
2.7 Å

Loop

Sequence
CGAAAG*CGCC*GAGACAC*GAAAAG*CAGAC*GG*CGGUAG
Length
36 nucleotides
Bulged bases
7UNV|1|A|A|935
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7UNV|1|A|C|807
7UNV|1|A|G|808
7UNV|1|A|A|809
7UNV|1|A|A|810
7UNV|1|A|A|811
7UNV|1|A|G|812
*
7UNV|1|A|C|825
7UNV|1|A|G|826
7UNV|1|A|C|827
7UNV|1|A|C|828
*
7UNV|1|A|G|930
7UNV|1|A|A|931
7UNV|1|A|G|932
7UNV|1|A|A|933
7UNV|1|A|C|934
7UNV|1|A|A|935
7UNV|1|A|C|936
*
7UNV|1|A|G|961
7UNV|1|A|A|962
7UNV|1|A|A|963
7UNV|1|A|A|964
7UNV|1|A|A|965
7UNV|1|A|G|966
*
7UNV|1|A|C|977
7UNV|1|A|A|978
7UNV|1|A|G|979
7UNV|1|A|A|980
7UNV|1|A|C|981
*
7UNV|1|A|G|1154
7UNV|1|A|G|1155
*
7UNV|1|A|C|1172
7UNV|1|A|G|1173
7UNV|1|A|G|1174
7UNV|1|A|U|1175
7UNV|1|A|A|1176
7UNV|1|A|G|1177

Current chains

Chain A
23S Ribosomal RNA

Nearby chains

Chain 2
50S ribosomal protein L30
Chain 7
50S ribosomal protein L35
Chain B
5S ribosomal RNA; 5S rRNA
Chain N
50S ribosomal protein L15
Chain S
50S ribosomal protein L20
Chain T
50S ribosomal protein L21

Coloring options:

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