J7_7UPH_002
3D structure
- PDB id
- 7UPH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a ribosome with tethered subunits
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.18 Å
Loop
- Sequence
- CGAAAG*CGCC*GAGACAC*GAAGAG*CAGAC*GC*GGGUAG
- Length
- 36 nucleotides
- Bulged bases
- 7UPH|1|I|A|2439
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7UPH|1|I|C|2317
7UPH|1|I|G|2318
7UPH|1|I|A|2319
7UPH|1|I|A|2320
7UPH|1|I|A|2321
7UPH|1|I|G|2322
*
7UPH|1|I|C|2335
7UPH|1|I|G|2336
7UPH|1|I|C|2337
7UPH|1|I|C|2338
*
7UPH|1|I|G|2434
7UPH|1|I|A|2435
7UPH|1|I|G|2436
7UPH|1|I|A|2437
7UPH|1|I|C|2438
7UPH|1|I|A|2439
7UPH|1|I|C|2440
*
7UPH|1|I|G|2465
7UPH|1|I|A|2466
7UPH|1|I|A|2467
7UPH|1|I|G|2468
7UPH|1|I|A|2469
7UPH|1|I|G|2470
*
7UPH|1|I|C|2481
7UPH|1|I|A|2482
7UPH|1|I|G|2483
7UPH|1|I|A|2484
7UPH|1|I|C|2485
*
7UPH|1|I|G|2657
7UPH|1|I|C|2658
*
7UPH|1|I|G|2679
7UPH|1|I|G|2680
7UPH|1|I|G|2681
7UPH|1|I|U|2682
7UPH|1|I|A|2683
7UPH|1|I|G|2684
Current chains
- Chain I
- Tethered rRNA
Nearby chains
- Chain J
- 5S ribosomal RNA; 5S rRNA
- Chain T
- 50S ribosomal protein L15
- Chain l
- 50S ribosomal protein L35
- Chain p
- 50S ribosomal protein L20
- Chain q
- 50S ribosomal protein L21
- Chain y
- 50S ribosomal protein L30
Coloring options: