3D structure

PDB id
7Z34 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of pre-60S particle bound to DRG1(AFG2)
Experimental method
ELECTRON MICROSCOPY
Resolution
3.8 Å

Loop

Sequence
CGAAGUUU*AUAG*UGGG*CGAUGC*GAACG*CC*GAGUAG
Length
35 nucleotides
Bulged bases
7Z34|1|1|G|1116
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7Z34|1|1|C|949
7Z34|1|1|G|950
7Z34|1|1|A|951
7Z34|1|1|A|952
7Z34|1|1|G|953
7Z34|1|1|U|954
7Z34|1|1|U|955
7Z34|1|1|U|956
*
7Z34|1|1|A|965
7Z34|1|1|U|966
7Z34|1|1|A|967
7Z34|1|1|G|968
*
7Z34|1|1|U|1114
7Z34|1|1|G|1115
7Z34|1|1|G|1116
7Z34|1|1|G|1117
*
7Z34|1|1|C|1141
7Z34|1|1|G|1142
7Z34|1|1|A|1143
7Z34|1|1|U|1144
7Z34|1|1|G|1145
7Z34|1|1|C|1146
*
7Z34|1|1|G|1157
7Z34|1|1|A|1158
7Z34|1|1|A|1159
7Z34|1|1|C|1160
7Z34|1|1|G|1161
*
7Z34|1|1|C|1338
7Z34|1|1|C|1339
*
7Z34|1|1|G|1365
7Z34|1|1|A|1366
7Z34|1|1|G|1367
7Z34|1|1|U|1368
7Z34|1|1|A|1369
7Z34|1|1|G|1370

Current chains

Chain 1
35S pre-ribosomal RNA

Nearby chains

Chain 2
5S ribosomal RNA; 5S rRNA
Chain C
60S ribosomal protein L4-A
Chain F
60S ribosomal protein L7-A
Chain K
60S ribosomal protein L28
Chain L
60S ribosomal protein L13-A
Chain Q
60S ribosomal protein L18-A
Chain T
60S ribosomal protein L21-A
Chain e
60S ribosomal protein L32
Chain f
60S ribosomal protein L33-A
Chain o
60S ribosomal protein L29

Coloring options:

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