J7_7ZPQ_001
3D structure
- PDB id
- 7ZPQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the RQT-bound 80S ribosome from S. cerevisiae (C1)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.47 Å
Loop
- Sequence
- CGAAGU*AG*UGGG*CGAUGC*GAACG*CC*GAGUAG
- Length
- 31 nucleotides
- Bulged bases
- 7ZPQ|1|5|G|1116
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7ZPQ|1|5|C|949
7ZPQ|1|5|G|950
7ZPQ|1|5|A|951
7ZPQ|1|5|A|952
7ZPQ|1|5|G|953
7ZPQ|1|5|U|954
*
7ZPQ|1|5|A|967
7ZPQ|1|5|G|968
*
7ZPQ|1|5|U|1114
7ZPQ|1|5|G|1115
7ZPQ|1|5|G|1116
7ZPQ|1|5|G|1117
*
7ZPQ|1|5|C|1141
7ZPQ|1|5|G|1142
7ZPQ|1|5|A|1143
7ZPQ|1|5|U|1144
7ZPQ|1|5|G|1145
7ZPQ|1|5|C|1146
*
7ZPQ|1|5|G|1157
7ZPQ|1|5|A|1158
7ZPQ|1|5|A|1159
7ZPQ|1|5|C|1160
7ZPQ|1|5|G|1161
*
7ZPQ|1|5|C|1338
7ZPQ|1|5|C|1339
*
7ZPQ|1|5|G|1365
7ZPQ|1|5|A|1366
7ZPQ|1|5|G|1367
7ZPQ|1|5|U|1368
7ZPQ|1|5|A|1369
7ZPQ|1|5|G|1370
Current chains
- Chain 5
- 25S ribosomal RNA
Nearby chains
- Chain 4
- 5S ribosomal RNA; 5S rRNA
- Chain BC
- RPL4A isoform 1
- Chain BF
- 60S ribosomal protein L7-A
- Chain BK
- 60S ribosomal protein L13-A
- Chain BP
- 60S ribosomal protein L18-A
- Chain BS
- 60S ribosomal protein L21-A
- Chain BZ
- 60S ribosomal protein L28
- Chain Ba
- 60S ribosomal protein L29
- Chain Bd
- RPL32 isoform 1
- Chain Be
- 60S ribosomal protein L33-A
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